Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| frvR | rhsD | b3897 | b0497 | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | 0.715 |
| frvR | waaL | b3897 | b3622 | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | O-antigen ligase; Adds the O-antigen on the glucose group of LPS. | 0.774 |
| frvR | waaU | b3897 | b3623 | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | Lipopolysaccharide core biosynthesis; Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS. | 0.773 |
| frvR | ycfT | b3897 | b1115 | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | Inner membrane protein. | 0.650 |
| frvR | yrbL | b3897 | b3207 | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | Mg(2+)-starvation-stimulated protein. | 0.423 |
| ompT | rhsD | b0565 | b0497 | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | 0.636 |
| ompT | sieB | b0565 | b1353 | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | Phage superinfection exclusion protein. | 0.669 |
| ompT | yehI | b0565 | b2118 | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | Uncharacterized protein YehI; DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function. | 0.678 |
| ompT | yfaL | b0565 | b2233 | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | Adhesin; Probably an autotransporter. | 0.786 |
| rhsD | frvR | b0497 | b3897 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Putative frv operon regulator; Could be involved in the regulation of the transcription of the FRV operon. | 0.715 |
| rhsD | ompT | b0497 | b0565 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | 0.636 |
| rhsD | sieB | b0497 | b1353 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Phage superinfection exclusion protein. | 0.669 |
| rhsD | waaL | b0497 | b3622 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | O-antigen ligase; Adds the O-antigen on the glucose group of LPS. | 0.717 |
| rhsD | waaU | b0497 | b3623 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Lipopolysaccharide core biosynthesis; Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS. | 0.710 |
| rhsD | ybbC | b0497 | b0498 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Putative immunity protein. | 0.653 |
| rhsD | ycfT | b0497 | b1115 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Inner membrane protein. | 0.610 |
| rhsD | yehI | b0497 | b2118 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Uncharacterized protein YehI; DUF4132 family pseudogene; defective yehI paralog; molybdate metabolism regulator, first fragment; molybdate metabolism regulator, second fragment 2; yehI' molR mutations have phenotypes and the N-terminal molR fragment of yehI' may be expressed and may have retained or evolved MolR function. | 0.710 |
| rhsD | yfaL | b0497 | b2233 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Adhesin; Probably an autotransporter. | 0.608 |
| rhsD | yrbL | b0497 | b3207 | Rhs protein with DUF4329 family putative toxin domain; Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell. | Mg(2+)-starvation-stimulated protein. | 0.654 |
| sieB | ompT | b1353 | b0565 | Phage superinfection exclusion protein. | DLP12 prophage; Protease that can cleave T7 RNA polymerase, ferric enterobactin receptor protein (FEP), antimicrobial peptide protamine and other proteins. This protease has a specificity for paired basic residues. | 0.669 |
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