node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ninE | pth | b0548 | b1204 | DLP12 prophage; Similar to phage 82 and lambda proteins. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Involved in lambda inhibition of host protein synthesis. PTH activity may, directly or indirectly, be the target for lambda bar RNA leading to rap cell death. | 0.507 |
ninE | quuD | b0548 | b0551 | DLP12 prophage; Similar to phage 82 and lambda proteins. | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | 0.545 |
ninE | rusA | b0548 | b0550 | DLP12 prophage; Similar to phage 82 and lambda proteins. | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | 0.791 |
ninE | ybcL | b0548 | b0545 | DLP12 prophage; Similar to phage 82 and lambda proteins. | Inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein. | 0.506 |
ninE | ybcM | b0548 | b0546 | DLP12 prophage; Similar to phage 82 and lambda proteins. | DLP12 prophage; Putative ARAC-type regulatory protein. | 0.506 |
ninE | ybcN | b0548 | b0547 | DLP12 prophage; Similar to phage 82 and lambda proteins. | DLP12 prophage; uncharacterized protein. | 0.923 |
ninE | ybcO | b0548 | b0549 | DLP12 prophage; Similar to phage 82 and lambda proteins. | DLP12 prophage; Based on its fold and a conserved His residue, has been predicted to be a nuclease; Belongs to the YbcO family. | 0.788 |
ninE | ylcG | b0548 | b4509 | DLP12 prophage; Similar to phage 82 and lambda proteins. | Uncharacterized protein, DLP12 prophage. | 0.773 |
ninE | ylcH | b0548 | b4588 | DLP12 prophage; Similar to phage 82 and lambda proteins. | Uncharacterized protein, DLP12 prophage. | 0.773 |
pth | ninE | b1204 | b0548 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Involved in lambda inhibition of host protein synthesis. PTH activity may, directly or indirectly, be the target for lambda bar RNA leading to rap cell death. | DLP12 prophage; Similar to phage 82 and lambda proteins. | 0.507 |
quuD | ninE | b0551 | b0548 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | DLP12 prophage; Similar to phage 82 and lambda proteins. | 0.545 |
quuD | rusA | b0551 | b0550 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | 0.545 |
quuD | ybcN | b0551 | b0547 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | DLP12 prophage; uncharacterized protein. | 0.551 |
quuD | ybcO | b0551 | b0549 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | DLP12 prophage; Based on its fold and a conserved His residue, has been predicted to be a nuclease; Belongs to the YbcO family. | 0.569 |
quuD | ylcG | b0551 | b4509 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | Uncharacterized protein, DLP12 prophage. | 0.545 |
quuD | ylcH | b0551 | b4588 | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | Uncharacterized protein, DLP12 prophage. | 0.545 |
rusA | ninE | b0550 | b0548 | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | DLP12 prophage; Similar to phage 82 and lambda proteins. | 0.791 |
rusA | quuD | b0550 | b0551 | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | DLP12 prophage; Positively regulate expression of some phage genes. Bacterial host RNA polymerase modified by antitermination proteins transcribes through termination sites that otherwise prevent expression of the regulated genes (By similarity); Belongs to the phage antitermination Q type 1 family. | 0.545 |
rusA | ybcL | b0550 | b0545 | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | Inactive polymorphonuclear leukocyte migration suppressor; DLP12 prophage; UPF0098 family secreted protein. | 0.499 |
rusA | ybcM | b0550 | b0546 | DLP12 prophage; Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of CC dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC. | DLP12 prophage; Putative ARAC-type regulatory protein. | 0.506 |