STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
envYPorin thermoregulatory transcriptional activator; Influences the temperature-dependent expression of several E.coli envelope proteins, most notably the porins OmpF and OmpC and the lambda receptor, LamB. (253 aa)    
Predicted Functional Partners:
ybcM
DLP12 prophage; Putative ARAC-type regulatory protein.
  
     0.726
rhaR
Transcriptional activator of rhaSR; Activates expression of the rhaSR operon in response to L- rhamnose.
  
  
 0.656
ybcH
PRK09936 family protein.
     
 0.651
yidL
Putative ARAC-type regulatory protein; Protein involved in transcription activator activity and transcription.
  
   
 0.635
ypdC
Putative ARAC-type regulatory protein; Protein involved in transcription activator activity and transcription.
  
   
 0.604
araC
Ara regulon transcriptional activator; Transcription factor that regulates the expression of several genes involved in the transport and metabolism of L-arabinose. Functions both as a positive and a negative regulator. In the presence of arabinose, activates the expression of the araBAD, araE, araFGH and araJ promoters. In the absence of arabinose, negatively regulates the araBAD operon. Represses its own transcription. Acts by binding directly to DNA.
  
   
 0.597
ydiP
Putative ARAC-type regulatory protein; Protein involved in transcription and regulation of transcription, DNA-dependent.
  
    0.571
nfrA
Bacteriophage N4 receptor, outer membrane subunit; (Microbial infection) Allows N4 phage attachment by binding to the viral non-contractile sheath protein.
  
  
 0.554
yijO
Putative ARAC-type regulatory protein; Protein involved in transcription activator activity and transcription.
  
     0.507
marC
UPF0056 family inner membrane protein.
      
 0.504
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.