STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybeRUncharacterized protein; To E.coli YbeU. (235 aa)    
Predicted Functional Partners:
djlB
Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding.
 
  
 0.933
ybeQ
Sel1 family TPR-like repeat protein; To E.coli YbeT.
  
  
 0.790
djlC
J domain-containing HscC co-chaperone; Hsc56.
 
  
 0.648
yehP
VMA domain putative YehL ATPase stimulator.
   
  
 0.624
yfaT
Uncharacterized protein YfaT; Pseudogene, bacterial alpha2-macroglobulin YfaS variant family; putative membrane protein; To P.aeruginosa PA4490 and T.maritima TM0986.
   
  
 0.622
yfjD
UPF0053 family inner membrane protein; Putative membrane protein.
      
 0.621
fhuA
Ferrichrome outer membrane transporter; Involved in the uptake of iron in complex with ferrichrome, a hydroxamate-type siderophore. Binds and transports ferrichrome-iron across the outer membrane. In addition to its role in ferrichrome-iron transport, transports the antibiotic albomycin, which is a structural analog of ferrichrome, and acts as a receptor for colicin M, microcin J25 and bacteriophages T1, T5, phi80 and UC-1. The energy source, which is required for all FhuA functions except infection by phage T5, is provided by the inner membrane TonB system.
    
 
 0.601
yncD
Putative iron outer membrane transporter; Probable receptor, TonB-dependent.
    
 
 0.574
ypjA
Adhesin-like autotransporter; Putative ATP-binding component of a transport system.
  
  
 0.572
yicL
EamA family inner membrane putative transporter; Putative permease transporter.
      
 0.534
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.