Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
osmB | ycfJ | b1283 | b1110 | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | Uncharacterized protein. | 0.738 |
osmB | ymgD | b1283 | b1171 | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.566 |
osmB | ymgG | b1283 | b1172 | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | UPF0757 family protein. | 0.405 |
yaaX | ymgD | b0005 | b1171 | DUF2502 family putative periplasmic protein; To E.coli YpeC. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.556 |
yaaX | ymgG | b0005 | b1172 | DUF2502 family putative periplasmic protein; To E.coli YpeC. | UPF0757 family protein. | 0.510 |
ycfJ | osmB | b1110 | b1283 | Uncharacterized protein. | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | 0.738 |
ycfJ | yegS | b1110 | b2086 | Uncharacterized protein. | Phosphatidylglycerol kinase, metal-dependent; In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. | 0.607 |
ycfJ | ymgD | b1110 | b1171 | Uncharacterized protein. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.618 |
ycfJ | ymgG | b1110 | b1172 | Uncharacterized protein. | UPF0757 family protein. | 0.536 |
ydiM | ydiP | b1690 | b1696 | Putative MFS transporter, membrane protein; Putative transport system permease protein. | Putative ARAC-type regulatory protein; Protein involved in transcription and regulation of transcription, DNA-dependent. | 0.693 |
ydiM | ymgD | b1690 | b1171 | Putative MFS transporter, membrane protein; Putative transport system permease protein. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.526 |
ydiP | ydiM | b1696 | b1690 | Putative ARAC-type regulatory protein; Protein involved in transcription and regulation of transcription, DNA-dependent. | Putative MFS transporter, membrane protein; Putative transport system permease protein. | 0.693 |
ydiP | ymgD | b1696 | b1171 | Putative ARAC-type regulatory protein; Protein involved in transcription and regulation of transcription, DNA-dependent. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.520 |
yegS | ycfJ | b2086 | b1110 | Phosphatidylglycerol kinase, metal-dependent; In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. | Uncharacterized protein. | 0.607 |
yegS | ymgD | b2086 | b1171 | Phosphatidylglycerol kinase, metal-dependent; In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.625 |
yegS | ymgG | b2086 | b1172 | Phosphatidylglycerol kinase, metal-dependent; In vitro phosphorylates phosphatidylglycerol but not diacylglycerol; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily. | UPF0757 family protein. | 0.622 |
yjbG | ymgD | b4028 | b1171 | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.808 |
yjbG | ymgG | b4028 | b1172 | Extracellular polysaccharide export OMA protein; To E.coli YmcB. | UPF0757 family protein. | 0.804 |
ymgD | osmB | b1171 | b1283 | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | Osmotically and stress inducible lipoprotein; Provides resistance to osmotic stress. May be important for stationary-phase survival. | 0.566 |
ymgD | yaaX | b1171 | b0005 | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | DUF2502 family putative periplasmic protein; To E.coli YpeC. | 0.556 |
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