Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
blc | uspB | b4149 | b3494 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | Protein involved in response to stress and xenobiotic metabolic process. | 0.405 |
blc | ycgB | b4149 | b1188 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | SpoVR family stationary phase protein; To B.subtilis SpoVR. | 0.819 |
blc | yeaG | b4149 | b1783 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | Protein kinase, endogenous substrate unidentified; autokinase; Belongs to the PrkA family. | 0.407 |
blc | yfcG | b4149 | b2302 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | GSH-dependent disulfide bond oxidoreductase; Exhibits a very robust glutathione (GSH)-dependent disulfide- bond reductase activity toward the model substrate, 2-hydroxyethyl disulfide; the actual physiological substrates are not known. Has also a low GSH-dependent hydroperoxidase activity toward cumene hydroperoxide, but does not reduce H(2)O(2), tert-butyl hydroperoxide, benzyl peroxide, or lauroyl peroxide. Exhibits little or no GSH transferase activity with most typical electrophilic substrates, and has no detectable transferase activity using glutathionylspermidine (GspSH) as the n [...] | 0.739 |
blc | yhfG | b4149 | b3362 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | Putative antitoxin for Fic. | 0.433 |
blc | yodD | b4149 | b1953 | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | Uncharacterized protein. | 0.574 |
uspB | blc | b3494 | b4149 | Protein involved in response to stress and xenobiotic metabolic process. | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | 0.405 |
uspB | yccJ | b3494 | b1003 | Protein involved in response to stress and xenobiotic metabolic process. | Uncharacterized protein. | 0.495 |
uspB | ycgB | b3494 | b1188 | Protein involved in response to stress and xenobiotic metabolic process. | SpoVR family stationary phase protein; To B.subtilis SpoVR. | 0.772 |
uspB | yegP | b3494 | b2080 | Protein involved in response to stress and xenobiotic metabolic process. | UPF0339 family protein; Belongs to the UPF0339 family. Duplicated subfamily. | 0.540 |
uspB | yhfG | b3494 | b3362 | Protein involved in response to stress and xenobiotic metabolic process. | Putative antitoxin for Fic. | 0.748 |
uspB | yodD | b3494 | b1953 | Protein involved in response to stress and xenobiotic metabolic process. | Uncharacterized protein. | 0.771 |
uspB | yohC | b3494 | b2135 | Protein involved in response to stress and xenobiotic metabolic process. | Yip1 family inner membrane protein. | 0.700 |
yccJ | uspB | b1003 | b3494 | Uncharacterized protein. | Protein involved in response to stress and xenobiotic metabolic process. | 0.495 |
yccJ | ycgB | b1003 | b1188 | Uncharacterized protein. | SpoVR family stationary phase protein; To B.subtilis SpoVR. | 0.754 |
yccJ | yeaG | b1003 | b1783 | Uncharacterized protein. | Protein kinase, endogenous substrate unidentified; autokinase; Belongs to the PrkA family. | 0.752 |
yccJ | yegP | b1003 | b2080 | Uncharacterized protein. | UPF0339 family protein; Belongs to the UPF0339 family. Duplicated subfamily. | 0.711 |
yccJ | yhfG | b1003 | b3362 | Uncharacterized protein. | Putative antitoxin for Fic. | 0.532 |
yccJ | yodD | b1003 | b1953 | Uncharacterized protein. | Uncharacterized protein. | 0.407 |
ycgB | blc | b1188 | b4149 | SpoVR family stationary phase protein; To B.subtilis SpoVR. | Outer membrane lipoprotein cell division and growth lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids; Belongs to the calycin superfamily. Lipocalin family. | 0.819 |
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