STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycgYUncharacterized protein. (146 aa)    
Predicted Functional Partners:
yncH
IPR020099 family protein.
   
  
 0.893
ymgE
UPF0410 family putative inner membrane protein; Transglycosylase asociated protein.
  
  
 0.891
ybeT
Sel1 family TPR-like repeat protein.
      
 0.817
yiiR
DUF805 family putative inner membrane protein.
      
 0.810
ycjO
Putative sugar ABC transporter permease; Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
      
 0.808
yebY
DUF2511 family protein.
      
 0.808
yafL
Putative lipoprotein and C40 family peptidase; Putative lipoprotein.
   
  
 0.807
hyfJ
Putative processing element hydrogenase 4; Possible component of hydrogenase 4.
      
 0.800
ychE
UPF0056 family inner membrane protein; Putative channel protein.
      
 0.645
yeaE
Aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent; Putative an aldehyde reductase.
      
 0.622
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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