Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hyfJ | yafL | b2490 | b0227 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | 0.622 |
hyfJ | ybeT | b2490 | b0647 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | Sel1 family TPR-like repeat protein. | 0.734 |
hyfJ | ycgY | b2490 | b1196 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | Uncharacterized protein. | 0.800 |
hyfJ | ycjO | b2490 | b1311 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | Putative sugar ABC transporter permease; Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily. | 0.624 |
hyfJ | yebY | b2490 | b1839 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | DUF2511 family protein. | 0.623 |
hyfJ | yiiR | b2490 | b3921 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | DUF805 family putative inner membrane protein. | 0.645 |
hyfJ | yncH | b2490 | b1455 | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | IPR020099 family protein. | 0.801 |
yafL | hyfJ | b0227 | b2490 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | 0.622 |
yafL | ybeT | b0227 | b0647 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | Sel1 family TPR-like repeat protein. | 0.780 |
yafL | ycgY | b0227 | b1196 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | Uncharacterized protein. | 0.807 |
yafL | ycjO | b0227 | b1311 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | Putative sugar ABC transporter permease; Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily. | 0.644 |
yafL | yeaE | b0227 | b1781 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | Aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent; Putative an aldehyde reductase. | 0.453 |
yafL | yebY | b0227 | b1839 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | DUF2511 family protein. | 0.644 |
yafL | yiiR | b0227 | b3921 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | DUF805 family putative inner membrane protein. | 0.730 |
yafL | yncH | b0227 | b1455 | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | IPR020099 family protein. | 0.806 |
ybeT | hyfJ | b0647 | b2490 | Sel1 family TPR-like repeat protein. | Putative processing element hydrogenase 4; Possible component of hydrogenase 4. | 0.734 |
ybeT | yafL | b0647 | b0227 | Sel1 family TPR-like repeat protein. | Putative lipoprotein and C40 family peptidase; Putative lipoprotein. | 0.780 |
ybeT | ycgY | b0647 | b1196 | Sel1 family TPR-like repeat protein. | Uncharacterized protein. | 0.817 |
ybeT | ycjO | b0647 | b1311 | Sel1 family TPR-like repeat protein. | Putative sugar ABC transporter permease; Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily. | 0.785 |
ybeT | ydjG | b0647 | b1771 | Sel1 family TPR-like repeat protein. | Methylglyoxal reductase, NADH-dependent; Catalyzes the NADH-dependent reduction of methylglyoxal (2- oxopropanal) in vitro. It is not known if this activity has physiological significance. Cannot use NADPH as a cosubstrate. Seems to play some role in intestinal colonization. | 0.521 |
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