STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gnsBQin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. (57 aa)    
Predicted Functional Partners:
ymgI
Uncharacterized protein.
      
 0.645
yghW
DUF2623 family protein.
      
 0.642
ynhF
Stress response membrane.
      
 0.622
ybjO
DUF2593 family inner membrane protein.
      
 0.621
yibT
Uncharacterized protein.
      
 0.566
ybjM
Inner membrane protein.
      
 0.528
ynfN
Qin prophage; cold shock-induced protein.
  
    0.463
ymcE
Cold shock gene; Suppresses fabA and ts growth mutation.
   
  
 0.408
cspI
Qin prophage; Cold shock-like protein.
  
  
 0.400
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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