Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cspI | gnsB | b1552 | b1550 | Qin prophage; Cold shock-like protein. | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | 0.400 |
cspI | ynfN | b1552 | b1551 | Qin prophage; Cold shock-like protein. | Qin prophage; cold shock-induced protein. | 0.912 |
gnsB | cspI | b1550 | b1552 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Qin prophage; Cold shock-like protein. | 0.400 |
gnsB | ybjM | b1550 | b0848 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Inner membrane protein. | 0.528 |
gnsB | ybjO | b1550 | b0858 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | DUF2593 family inner membrane protein. | 0.621 |
gnsB | yghW | b1550 | b2998 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | DUF2623 family protein. | 0.642 |
gnsB | yibT | b1550 | b4554 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Uncharacterized protein. | 0.566 |
gnsB | ymcE | b1550 | b0991 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Cold shock gene; Suppresses fabA and ts growth mutation. | 0.408 |
gnsB | ymgI | b1550 | b4593 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Uncharacterized protein. | 0.645 |
gnsB | ynfN | b1550 | b1551 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Qin prophage; cold shock-induced protein. | 0.463 |
gnsB | ynhF | b1550 | b4602 | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | Stress response membrane. | 0.622 |
ybjM | gnsB | b0848 | b1550 | Inner membrane protein. | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | 0.528 |
ybjM | ybjO | b0848 | b0858 | Inner membrane protein. | DUF2593 family inner membrane protein. | 0.506 |
ybjM | yghW | b0848 | b2998 | Inner membrane protein. | DUF2623 family protein. | 0.526 |
ybjM | ymgI | b0848 | b4593 | Inner membrane protein. | Uncharacterized protein. | 0.527 |
ybjO | gnsB | b0858 | b1550 | DUF2593 family inner membrane protein. | Qin prophage; Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold- sensitive secG null mutation. | 0.621 |
ybjO | ybjM | b0858 | b0848 | DUF2593 family inner membrane protein. | Inner membrane protein. | 0.506 |
ybjO | yghW | b0858 | b2998 | DUF2593 family inner membrane protein. | DUF2623 family protein. | 0.620 |
ybjO | yibT | b0858 | b4554 | DUF2593 family inner membrane protein. | Uncharacterized protein. | 0.504 |
ybjO | ymgI | b0858 | b4593 | DUF2593 family inner membrane protein. | Uncharacterized protein. | 0.621 |
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