Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
blr | ydgJ | b4409 | b1624 | Beta-lactam resistance membrane protein; Component of the cell division machinery, which is probably involved in the stabilization of the divisome under certain stress conditions. | Putative oxidoreductase. | 0.700 |
cobB | ydgJ | b1120 | b1624 | Deacetylase of acs and cheY, chemotaxis regulator; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Activates the enzyme acetyl-CoA synthetase by deacetylating 'Lys-609' in the inactive, acetylated form of the enzyme. May also modulate the activity of other propionyl-adenosine monophosphate (AMP)-forming enzymes. Belongs to the sirtuin family. Class III subfamily. | Putative oxidoreductase. | 0.843 |
yceM | ydgJ | b1068 | b1624 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative oxidoreductase. | 0.716 |
yceM | ydjJ | b1068 | b1774 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative oxidoreductase. | 0.474 |
yceM | ygfF | b1068 | b2902 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative oxidoreductase. | 0.521 |
yceM | yggP | b1068 | b4465 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative Zn-binding dehydrogenase; To K.pneumoniae SorE. | 0.475 |
yceM | ygjR | b1068 | b3087 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative NAD(P)-dependent dehydrogenase; Belongs to the Gfo/Idh/MocA family. | 0.678 |
yceM | yhiN | b1068 | b3492 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative oxidoreductase; To H.influenzae HI_0933. | 0.452 |
yceM | yjhC | b1068 | b4280 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent; Putative dehydrogenase; Belongs to the Gfo/Idh/MocA family. | 0.442 |
yceM | yohF | b1068 | b2137 | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.449 |
ydgJ | blr | b1624 | b4409 | Putative oxidoreductase. | Beta-lactam resistance membrane protein; Component of the cell division machinery, which is probably involved in the stabilization of the divisome under certain stress conditions. | 0.700 |
ydgJ | cobB | b1624 | b1120 | Putative oxidoreductase. | Deacetylase of acs and cheY, chemotaxis regulator; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. Activates the enzyme acetyl-CoA synthetase by deacetylating 'Lys-609' in the inactive, acetylated form of the enzyme. May also modulate the activity of other propionyl-adenosine monophosphate (AMP)-forming enzymes. Belongs to the sirtuin family. Class III subfamily. | 0.843 |
ydgJ | yceM | b1624 | b1068 | Putative oxidoreductase. | Putative virulence factor; Belongs to the Gfo/Idh/MocA family. | 0.716 |
ydgJ | ydjJ | b1624 | b1774 | Putative oxidoreductase. | Putative oxidoreductase. | 0.636 |
ydgJ | ygfF | b1624 | b2902 | Putative oxidoreductase. | Putative oxidoreductase. | 0.712 |
ydgJ | yggP | b1624 | b4465 | Putative oxidoreductase. | Putative Zn-binding dehydrogenase; To K.pneumoniae SorE. | 0.636 |
ydgJ | ygjR | b1624 | b3087 | Putative oxidoreductase. | Putative NAD(P)-dependent dehydrogenase; Belongs to the Gfo/Idh/MocA family. | 0.703 |
ydgJ | yhiN | b1624 | b3492 | Putative oxidoreductase. | Putative oxidoreductase; To H.influenzae HI_0933. | 0.622 |
ydgJ | yjhC | b1624 | b4280 | Putative oxidoreductase. | GFO/IDH/MOCA family putative oxidoreductase. NAD(P)-dependent; Putative dehydrogenase; Belongs to the Gfo/Idh/MocA family. | 0.688 |
ydgJ | yohF | b1624 | b2137 | Putative oxidoreductase. | Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.634 |
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