Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ycbF | ydjY | b0944 | b1751 | Putative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of fimbriae; Belongs to the periplasmic pilus chaperone family. | Putative ferrodoxin-like lipoprotein. | 0.901 |
ydiH | ydjX | b1685 | b1750 | Uncharacterized protein. | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | 0.522 |
ydiH | ydjY | b1685 | b1751 | Uncharacterized protein. | Putative ferrodoxin-like lipoprotein. | 0.700 |
ydiH | yeaQ | b1685 | b1795 | Uncharacterized protein. | UPF0410 family protein. | 0.532 |
ydjX | ydiH | b1750 | b1685 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Uncharacterized protein. | 0.522 |
ydjX | ydjY | b1750 | b1751 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Putative ferrodoxin-like lipoprotein. | 0.985 |
ydjX | ydjZ | b1750 | b1752 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | 0.939 |
ydjX | yeaQ | b1750 | b1795 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | UPF0410 family protein. | 0.478 |
ydjX | ynjA | b1750 | b1753 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c. | 0.912 |
ydjX | ynjB | b1750 | b1754 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Putative ABC transporter periplasmic binding protein. | 0.980 |
ydjX | ynjC | b1750 | b1755 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Putative ABC transporter permease; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane. | 0.969 |
ydjX | ynjD | b1750 | b1756 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Putative ABC transporter ATPase; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system. | 0.956 |
ydjX | ynjE | b1750 | b1757 | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | Molybdopterin synthase sulfurtransferase; Putative thiosulfate sulfur transferase; Protein involved in sulfur metabolic process. | 0.916 |
ydjY | ycbF | b1751 | b0944 | Putative ferrodoxin-like lipoprotein. | Putative periplasmic pilin chaperone; Part of the elfADCG-ycbUVF fimbrial operon, which promotes adhesion of bacteria to different abiotic surfaces. Could be required for the biogenesis of fimbriae; Belongs to the periplasmic pilus chaperone family. | 0.901 |
ydjY | ydiH | b1751 | b1685 | Putative ferrodoxin-like lipoprotein. | Uncharacterized protein. | 0.700 |
ydjY | ydjX | b1751 | b1750 | Putative ferrodoxin-like lipoprotein. | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | 0.985 |
ydjY | ydjZ | b1751 | b1752 | Putative ferrodoxin-like lipoprotein. | TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family. | 0.977 |
ydjY | yeaQ | b1751 | b1795 | Putative ferrodoxin-like lipoprotein. | UPF0410 family protein. | 0.730 |
ydjY | ynjA | b1751 | b1753 | Putative ferrodoxin-like lipoprotein. | Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c. | 0.957 |
ydjY | ynjB | b1751 | b1754 | Putative ferrodoxin-like lipoprotein. | Putative ABC transporter periplasmic binding protein. | 0.973 |
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