STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjCPutative ABC transporter permease; Probably part of the binding-protein-dependent transport system YnjCD. Probably responsible for the translocation of the substrate across the membrane. (511 aa)    
Predicted Functional Partners:
ynjD
Putative ABC transporter ATPase; Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system.
 
 0.998
ynjB
Putative ABC transporter periplasmic binding protein.
 
 
 0.997
ydjZ
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family.
 
  
 0.974
ydjX
TVP38/TMEM64 family inner membrane protein; Belongs to the TVP38/TMEM64 family.
 
   
 0.969
ydjY
Putative ferrodoxin-like lipoprotein.
  
  
 0.969
ynjA
Carboxymuconolactone decarboxylase family protein; To M.tuberculosis Rv2313c.
 
  
 0.966
ynjE
Molybdopterin synthase sulfurtransferase; Putative thiosulfate sulfur transferase; Protein involved in sulfur metabolic process.
 
  
 0.899
ynjF
CDP-alcohol phosphatidyltransferase family inner membrane protein; Putative cytochrome oxidase.
 
     0.802
ydhS
Putative oxidoreductase.
  
     0.722
thiB
Thiamine/thiamine pyrophosphate/thiamine monophosphate ABC transporter periplasmic binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Binds thiamine, thiamine phosphate and thiamine diphosphate with high affinity ; Belongs to the bacterial solute-binding protein 1 family.
  
  
  0.632
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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