STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yebYDUF2511 family protein. (113 aa)    
Predicted Functional Partners:
yebZ
Inner membrane protein; Putative resistance protein; Protein involved in response to drug.
  
  
 0.983
yobA
CopC family protein.
  
  
 0.899
ycgY
Uncharacterized protein.
      
 0.808
yncH
IPR020099 family protein.
      
 0.808
ybeT
Sel1 family TPR-like repeat protein.
      
 0.783
yiiR
DUF805 family putative inner membrane protein.
      
 0.731
ycjO
Putative sugar ABC transporter permease; Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
      
 0.645
yafL
Putative lipoprotein and C40 family peptidase; Putative lipoprotein.
      
 0.644
pphA
Serine/threonine-specific protein phosphatase 1; Plays a key role in signaling protein misfolding via the CpxR/CPXA transducing system. It also modulates the phosphorylated status of many phosphoproteins in E.coli, some of which acting as major chaperones. Has been shown, in vitro, to act on Ser, Thr and Tyr- phosphorylated substrates; Belongs to the PPP phosphatase family. PP-1 subfamily.
  
  
 0.624
hyfJ
Putative processing element hydrogenase 4; Possible component of hydrogenase 4.
      
 0.623
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.