Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
djlB | yebB | b0646 | b1862 | Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding. | DUF830 family protein; To E.coli YiiX. | 0.745 |
djlB | yfeK | b0646 | b2419 | Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding. | Uncharacterized protein. | 0.591 |
djlB | yhgE | b0646 | b3402 | Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding. | DUF4153 family putative inner membrane protein; Putative transport. | 0.528 |
djlB | ylbF | b0646 | b0520 | Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding. | Putative anaerobic allantoin catabolic oxamate carbamoyltransferase; Putative carboxylase. | 0.544 |
yebB | djlB | b1862 | b0646 | DUF830 family protein; To E.coli YiiX. | Putative HscC co-chaperone, uncharacterized J domain-containing protein; Putative enzyme of polynucleotide modification; Protein involved in protein folding. | 0.745 |
yebB | yfaL | b1862 | b2233 | DUF830 family protein; To E.coli YiiX. | Adhesin; Probably an autotransporter. | 0.619 |
yebB | yfeK | b1862 | b2419 | DUF830 family protein; To E.coli YiiX. | Uncharacterized protein. | 0.679 |
yebB | yhgE | b1862 | b3402 | DUF830 family protein; To E.coli YiiX. | DUF4153 family putative inner membrane protein; Putative transport. | 0.938 |
yebB | yjjA | b1862 | b4360 | DUF830 family protein; To E.coli YiiX. | Putative DUF2501 family periplasmic protein; Putative glycoprotein/receptor. | 0.644 |
yebB | yjjB | b1862 | b4363 | DUF830 family protein; To E.coli YiiX. | DUF3815 family inner membrane protein. | 0.572 |
yebB | ylbF | b1862 | b0520 | DUF830 family protein; To E.coli YiiX. | Putative anaerobic allantoin catabolic oxamate carbamoyltransferase; Putative carboxylase. | 0.656 |
yebB | ynbA | b1862 | b1408 | DUF830 family protein; To E.coli YiiX. | Inner membrane protein. | 0.572 |
yebB | ynbC | b1862 | b1410 | DUF830 family protein; To E.coli YiiX. | Putative esterase. | 0.677 |
yebB | ynbD | b1862 | b1411 | DUF830 family protein; To E.coli YiiX. | Putative phosphatase inner membrane protein; Putative enzymes; Belongs to the protein-tyrosine phosphatase family. | 0.714 |
yfaL | yebB | b2233 | b1862 | Adhesin; Probably an autotransporter. | DUF830 family protein; To E.coli YiiX. | 0.619 |
yfaL | yhgE | b2233 | b3402 | Adhesin; Probably an autotransporter. | DUF4153 family putative inner membrane protein; Putative transport. | 0.702 |
yfaL | ylbF | b2233 | b0520 | Adhesin; Probably an autotransporter. | Putative anaerobic allantoin catabolic oxamate carbamoyltransferase; Putative carboxylase. | 0.607 |
yfaL | ynbA | b2233 | b1408 | Adhesin; Probably an autotransporter. | Inner membrane protein. | 0.408 |
yfaL | ynbC | b2233 | b1410 | Adhesin; Probably an autotransporter. | Putative esterase. | 0.548 |
yfaL | ynbD | b2233 | b1411 | Adhesin; Probably an autotransporter. | Putative phosphatase inner membrane protein; Putative enzymes; Belongs to the protein-tyrosine phosphatase family. | 0.629 |
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