Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
tamA | yedD | b4220 | b1928 | Translocation and assembly module for autotransporter export, outer membrane subunit; Part of the translocation and assembly module (TAM) autotransporter assembly complex, which functions in translocation of autotransporters across the outer membrane. Allows substrate (Ag43, AC P39180) to initiate penetration into the outer membrane; TamB is not necessary but may regulate this activity. Has anion selective channel- forming ability, but the physiological relevance of this activity is unclear ; Belongs to the TamA family. | Lipoprotein. | 0.627 |
tamA | yiaF | b4220 | b3554 | Translocation and assembly module for autotransporter export, outer membrane subunit; Part of the translocation and assembly module (TAM) autotransporter assembly complex, which functions in translocation of autotransporters across the outer membrane. Allows substrate (Ag43, AC P39180) to initiate penetration into the outer membrane; TamB is not necessary but may regulate this activity. Has anion selective channel- forming ability, but the physiological relevance of this activity is unclear ; Belongs to the TamA family. | Barrier effect co-colonization resistance factor; DUF3053 family lipoprotein. | 0.417 |
yajG | yedD | b0434 | b1928 | Putative polymerase/proteinase. | Lipoprotein. | 0.631 |
ydiY | yedD | b1722 | b1928 | Acid-inducible putative outer membrane protein. | Lipoprotein. | 0.641 |
ydiY | yedF | b1722 | b1930 | Acid-inducible putative outer membrane protein. | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | 0.643 |
ydiY | yiaF | b1722 | b3554 | Acid-inducible putative outer membrane protein. | Barrier effect co-colonization resistance factor; DUF3053 family lipoprotein. | 0.402 |
yedD | tamA | b1928 | b4220 | Lipoprotein. | Translocation and assembly module for autotransporter export, outer membrane subunit; Part of the translocation and assembly module (TAM) autotransporter assembly complex, which functions in translocation of autotransporters across the outer membrane. Allows substrate (Ag43, AC P39180) to initiate penetration into the outer membrane; TamB is not necessary but may regulate this activity. Has anion selective channel- forming ability, but the physiological relevance of this activity is unclear ; Belongs to the TamA family. | 0.627 |
yedD | yajG | b1928 | b0434 | Lipoprotein. | Putative polymerase/proteinase. | 0.631 |
yedD | ydiY | b1928 | b1722 | Lipoprotein. | Acid-inducible putative outer membrane protein. | 0.641 |
yedD | yedE | b1928 | b1929 | Lipoprotein. | UPF0394 family sulphur transport domain-containing inner membrane protein; Putative transport system permease protein; Belongs to the UPF0394 family. | 0.509 |
yedD | yedF | b1928 | b1930 | Lipoprotein. | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | 0.510 |
yedD | yiaF | b1928 | b3554 | Lipoprotein. | Barrier effect co-colonization resistance factor; DUF3053 family lipoprotein. | 0.671 |
yedD | ynfB | b1928 | b1583 | Lipoprotein. | UPF0482 family putative periplasmic protein. | 0.644 |
yedE | yedD | b1929 | b1928 | UPF0394 family sulphur transport domain-containing inner membrane protein; Putative transport system permease protein; Belongs to the UPF0394 family. | Lipoprotein. | 0.509 |
yedE | yedF | b1929 | b1930 | UPF0394 family sulphur transport domain-containing inner membrane protein; Putative transport system permease protein; Belongs to the UPF0394 family. | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | 0.999 |
yedF | ydiY | b1930 | b1722 | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | Acid-inducible putative outer membrane protein. | 0.643 |
yedF | yedD | b1930 | b1928 | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | Lipoprotein. | 0.510 |
yedF | yedE | b1930 | b1929 | Putative TusA family sulfurtransferase; Belongs to the sulfur carrier protein TusA family. | UPF0394 family sulphur transport domain-containing inner membrane protein; Putative transport system permease protein; Belongs to the UPF0394 family. | 0.999 |
yiaF | tamA | b3554 | b4220 | Barrier effect co-colonization resistance factor; DUF3053 family lipoprotein. | Translocation and assembly module for autotransporter export, outer membrane subunit; Part of the translocation and assembly module (TAM) autotransporter assembly complex, which functions in translocation of autotransporters across the outer membrane. Allows substrate (Ag43, AC P39180) to initiate penetration into the outer membrane; TamB is not necessary but may regulate this activity. Has anion selective channel- forming ability, but the physiological relevance of this activity is unclear ; Belongs to the TamA family. | 0.417 |
yiaF | ydiY | b3554 | b1722 | Barrier effect co-colonization resistance factor; DUF3053 family lipoprotein. | Acid-inducible putative outer membrane protein. | 0.402 |
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