Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dsrB | yodD | b1952 | b1953 | Uncharacterized protein. | Uncharacterized protein. | 0.785 |
| fic | uspB | b3361 | b3494 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | Protein involved in response to stress and xenobiotic metabolic process. | 0.740 |
| fic | ycgB | b3361 | b1188 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | SpoVR family stationary phase protein; To B.subtilis SpoVR. | 0.661 |
| fic | yedP | b3361 | b1955 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | Putative mannosyl-3-phosphoglycerate phosphatase. | 0.418 |
| fic | yegP | b3361 | b2080 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | UPF0339 family protein; Belongs to the UPF0339 family. Duplicated subfamily. | 0.570 |
| fic | ygaU | b3361 | b2665 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | Uncharacterized protein; Highly specific potassium binding protein that is required for normal growth in the presence of high levels of external K(+). May act as a sensor of cytoplasmic K(+) concentration. Binds a single K(+) ion, which induces a large conformational change. Can also bind the larger alkali metal ions Rb(+) and Cs(+), and NH(4)(+). May be involved in the regulation of peptidoglycan cross-linking. | 0.711 |
| fic | yiaG | b3361 | b3555 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | HTH_CROC1 family putative transcriptional regulator; Protein involved in regulation of transcription, DNA-dependent. | 0.473 |
| fic | yjdN | b3361 | b4107 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | Metalloprotein superfamily protein. | 0.743 |
| fic | yodD | b3361 | b1953 | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | Uncharacterized protein. | 0.717 |
| uspB | fic | b3494 | b3361 | Protein involved in response to stress and xenobiotic metabolic process. | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | 0.740 |
| uspB | ycgB | b3494 | b1188 | Protein involved in response to stress and xenobiotic metabolic process. | SpoVR family stationary phase protein; To B.subtilis SpoVR. | 0.772 |
| uspB | yegP | b3494 | b2080 | Protein involved in response to stress and xenobiotic metabolic process. | UPF0339 family protein; Belongs to the UPF0339 family. Duplicated subfamily. | 0.540 |
| uspB | ygaU | b3494 | b2665 | Protein involved in response to stress and xenobiotic metabolic process. | Uncharacterized protein; Highly specific potassium binding protein that is required for normal growth in the presence of high levels of external K(+). May act as a sensor of cytoplasmic K(+) concentration. Binds a single K(+) ion, which induces a large conformational change. Can also bind the larger alkali metal ions Rb(+) and Cs(+), and NH(4)(+). May be involved in the regulation of peptidoglycan cross-linking. | 0.639 |
| uspB | yiaG | b3494 | b3555 | Protein involved in response to stress and xenobiotic metabolic process. | HTH_CROC1 family putative transcriptional regulator; Protein involved in regulation of transcription, DNA-dependent. | 0.449 |
| uspB | yjdN | b3494 | b4107 | Protein involved in response to stress and xenobiotic metabolic process. | Metalloprotein superfamily protein. | 0.449 |
| uspB | yodD | b3494 | b1953 | Protein involved in response to stress and xenobiotic metabolic process. | Uncharacterized protein. | 0.771 |
| ycgB | fic | b1188 | b3361 | SpoVR family stationary phase protein; To B.subtilis SpoVR. | Stationary phase-induced protein, putative toxin; Probable adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins (By similarity). Involved in cell filamentation induced by cyclic AMP. May have some role in cell division. | 0.661 |
| ycgB | uspB | b1188 | b3494 | SpoVR family stationary phase protein; To B.subtilis SpoVR. | Protein involved in response to stress and xenobiotic metabolic process. | 0.772 |
| ycgB | yebV | b1188 | b1836 | SpoVR family stationary phase protein; To B.subtilis SpoVR. | Uncharacterized protein. | 0.426 |
| ycgB | yedP | b1188 | b1955 | SpoVR family stationary phase protein; To B.subtilis SpoVR. | Putative mannosyl-3-phosphoglycerate phosphatase. | 0.677 |
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