Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sslE | yfbK | b4466 | b2270 | Putative secreted and surface-associated lipoprotein mucinase; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of folded proteins across the outer membrane. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.775 |
yceA | yfbK | b1055 | b2270 | Putative rhodanese-related sulfurtransferase; Protein involved in cell cycle; Belongs to the UPF0176 family. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.580 |
yceA | yibA | b1055 | b3594 | Putative rhodanese-related sulfurtransferase; Protein involved in cell cycle; Belongs to the UPF0176 family. | Putative immunity protein for polymorphic toxin RhsA; HEAT-domain protein; lethality reduction protein. | 0.450 |
yecA | yfbK | b1908 | b2270 | UPF0149 family protein. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.621 |
yfbK | sslE | b2270 | b4466 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Putative secreted and surface-associated lipoprotein mucinase; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of folded proteins across the outer membrane. | 0.775 |
yfbK | yceA | b2270 | b1055 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Putative rhodanese-related sulfurtransferase; Protein involved in cell cycle; Belongs to the UPF0176 family. | 0.580 |
yfbK | yecA | b2270 | b1908 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | UPF0149 family protein. | 0.621 |
yfbK | yfbL | b2270 | b2271 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Putative aminopeptidase. | 0.811 |
yfbK | yfbM | b2270 | b2272 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | DUF1877 family protein. | 0.760 |
yfbK | yfbN | b2270 | b2273 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Uncharacterized protein. | 0.619 |
yfbK | yfbO | b2270 | b2274 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Uncharacterized protein. | 0.761 |
yfbK | yfbP | b2270 | b2275 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | TPR-like repeats-containing protein. | 0.676 |
yfbK | yfiM | b2270 | b2586 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Putative lipoprotein. | 0.544 |
yfbK | yibA | b2270 | b3594 | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | Putative immunity protein for polymorphic toxin RhsA; HEAT-domain protein; lethality reduction protein. | 0.554 |
yfbL | yfbK | b2271 | b2270 | Putative aminopeptidase. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.811 |
yfbL | yfbM | b2271 | b2272 | Putative aminopeptidase. | DUF1877 family protein. | 0.870 |
yfbL | yfbN | b2271 | b2273 | Putative aminopeptidase. | Uncharacterized protein. | 0.696 |
yfbL | yfbO | b2271 | b2274 | Putative aminopeptidase. | Uncharacterized protein. | 0.811 |
yfbL | yfbP | b2271 | b2275 | Putative aminopeptidase. | TPR-like repeats-containing protein. | 0.802 |
yfbM | yfbK | b2272 | b2270 | DUF1877 family protein. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.760 |
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