STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfbKVon Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. (575 aa)    
Predicted Functional Partners:
yfbL
Putative aminopeptidase.
  
  
 0.811
sslE
Putative secreted and surface-associated lipoprotein mucinase; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of folded proteins across the outer membrane.
  
   
 0.775
yfbO
Uncharacterized protein.
  
  
 0.761
yfbM
DUF1877 family protein.
  
  
 0.760
yfbP
TPR-like repeats-containing protein.
  
  
 0.676
yecA
UPF0149 family protein.
      
 0.621
yfbN
Uncharacterized protein.
   
  
 0.619
yceA
Putative rhodanese-related sulfurtransferase; Protein involved in cell cycle; Belongs to the UPF0176 family.
  
   
 0.580
yibA
Putative immunity protein for polymorphic toxin RhsA; HEAT-domain protein; lethality reduction protein.
  
  
 0.554
yfiM
Putative lipoprotein.
      
 0.544
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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