Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
csiE | yfhR | b2535 | b2534 | Stationary phase inducible protein. | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | 0.449 |
csiE | yhgE | b2535 | b3402 | Stationary phase inducible protein. | DUF4153 family putative inner membrane protein; Putative transport. | 0.700 |
suhB | yfhR | b2533 | b2534 | Inositol-1-monophosphatase; Protein involved in transcription. | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | 0.502 |
yfhR | csiE | b2534 | b2535 | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | Stationary phase inducible protein. | 0.449 |
yfhR | suhB | b2534 | b2533 | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | Inositol-1-monophosphatase; Protein involved in transcription. | 0.502 |
yfhR | yhgE | b2534 | b3402 | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | DUF4153 family putative inner membrane protein; Putative transport. | 0.483 |
yhgE | csiE | b3402 | b2535 | DUF4153 family putative inner membrane protein; Putative transport. | Stationary phase inducible protein. | 0.700 |
yhgE | yfhR | b3402 | b2534 | DUF4153 family putative inner membrane protein; Putative transport. | Putative S9 family prolyl oligopeptidase; Putative enzyme (3.4.-). | 0.483 |