Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arpA | ygeH | b4017 | b2852 | Ankyrin repeat protein. | Putative transcriptional regulator; Putative invasion protein. | 0.414 |
arpA | yhhZ | b4017 | b3442 | Ankyrin repeat protein. | Putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity; Belongs to the hcp1 family. | 0.528 |
arpA | yjbL | b4017 | b4047 | Ankyrin repeat protein. | Uncharacterized protein. | 0.565 |
arpA | yqeK | b4017 | b2849 | Ankyrin repeat protein. | Uncharacterized protein. | 0.680 |
tdcR | yhaB | b3119 | b3120 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Uncharacterized protein. | 0.600 |
tdcR | yhhZ | b3119 | b3442 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity; Belongs to the hcp1 family. | 0.528 |
tdcR | yqeK | b3119 | b2849 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Uncharacterized protein. | 0.624 |
wbbI | yqeK | b2034 | b2849 | d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase; Involved in the transfer of galactofuranose (Galf) onto an alpha-D-gluco-configured acceptor substrate to form a beta-1,6-linkage. It uses n-octyl alpha-D-glucopyranoside as an acceptor substrate for the addition of galactofuranose from the donor substrate UDP- galactofuranose. It is not able to use beta-D-glucopyranoside isomers. | Uncharacterized protein. | 0.784 |
ygeG | ygeH | b2851 | b2852 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Putative transcriptional regulator; Putative invasion protein. | 0.888 |
ygeG | ygeI | b2851 | b2853 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Uncharacterized protein. | 0.722 |
ygeG | yhaB | b2851 | b3120 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Uncharacterized protein. | 0.603 |
ygeG | yqeK | b2851 | b2849 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Uncharacterized protein. | 0.844 |
ygeH | arpA | b2852 | b4017 | Putative transcriptional regulator; Putative invasion protein. | Ankyrin repeat protein. | 0.414 |
ygeH | ygeG | b2852 | b2851 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | 0.888 |
ygeH | ygeI | b2852 | b2853 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.847 |
ygeH | yhaB | b2852 | b3120 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.539 |
ygeH | yjbL | b2852 | b4047 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.538 |
ygeH | yqeK | b2852 | b2849 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.732 |
ygeI | ygeG | b2853 | b2851 | Uncharacterized protein. | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | 0.722 |
ygeI | ygeH | b2853 | b2852 | Uncharacterized protein. | Putative transcriptional regulator; Putative invasion protein. | 0.847 |
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