STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqeKUncharacterized protein. (141 aa)    
Predicted Functional Partners:
ygeG
Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family.
   
    0.844
wbbI
d-Galf:alpha-d-Glc beta-1,6-galactofuranosyltransferase; Involved in the transfer of galactofuranose (Galf) onto an alpha-D-gluco-configured acceptor substrate to form a beta-1,6-linkage. It uses n-octyl alpha-D-glucopyranoside as an acceptor substrate for the addition of galactofuranose from the donor substrate UDP- galactofuranose. It is not able to use beta-D-glucopyranoside isomers.
      
 0.784
ygeI
Uncharacterized protein.
   
    0.748
yjbL
Uncharacterized protein.
   
    0.738
ygeH
Putative transcriptional regulator; Putative invasion protein.
   
    0.732
yhaB
Uncharacterized protein.
   
    0.720
arpA
Ankyrin repeat protein.
   
    0.680
yhhZ
Putative Hcp1 family polymorphic toxin protein; putative colicin-like DNase/tRNase activity; Belongs to the hcp1 family.
   
    0.643
tdcR
L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon.
   
    0.624
yhbY
RNA binding protein associated with pre-50S ribosomal subunits.
      
 0.530
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
Server load: low (28%) [HD]