Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
speA | yqgB | b2938 | b2939 | Biosynthetic arginine decarboxylase, PLP-binding; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily. | Uncharacterized protein; Belongs to the YqgB family. | 0.799 |
yceO | yjeV | b1058 | b4670 | Uncharacterized protein. | Uncharacterized protein. | 0.644 |
yceO | ylcH | b1058 | b4588 | Uncharacterized protein. | Uncharacterized protein, DLP12 prophage. | 0.640 |
yceO | yniD | b1058 | b4535 | Uncharacterized protein. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.644 |
yceO | yobF | b1058 | b1824 | Uncharacterized protein. | DUF2527 family heat-induced protein. | 0.625 |
yceO | yohO | b1058 | b4542 | Uncharacterized protein. | Putative membrane protein; Belongs to the UPF0387 family. | 0.655 |
yceO | yqcG | b1058 | b4682 | Uncharacterized protein. | Membrane stress resistance protein. | 0.623 |
yceO | yqgB | b1058 | b2939 | Uncharacterized protein. | Uncharacterized protein; Belongs to the YqgB family. | 0.789 |
yihY | yqgB | b3886 | b2939 | BrkB family putative transporter, inner membrane protein; tRNA processing exoribonuclease BN. | Uncharacterized protein; Belongs to the YqgB family. | 0.653 |
yjeV | yceO | b4670 | b1058 | Uncharacterized protein. | Uncharacterized protein. | 0.644 |
yjeV | ylcH | b4670 | b4588 | Uncharacterized protein. | Uncharacterized protein, DLP12 prophage. | 0.802 |
yjeV | yniD | b4670 | b4535 | Uncharacterized protein. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.804 |
yjeV | yobF | b4670 | b1824 | Uncharacterized protein. | DUF2527 family heat-induced protein. | 0.509 |
yjeV | yohO | b4670 | b4542 | Uncharacterized protein. | Putative membrane protein; Belongs to the UPF0387 family. | 0.804 |
yjeV | yqgB | b4670 | b2939 | Uncharacterized protein. | Uncharacterized protein; Belongs to the YqgB family. | 0.645 |
ylcH | yceO | b4588 | b1058 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein. | 0.640 |
ylcH | yjeV | b4588 | b4670 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein. | 0.802 |
ylcH | yniD | b4588 | b4535 | Uncharacterized protein, DLP12 prophage. | Uncharacterized protein YniD; Pseudogene, ankyrin repeats. | 0.803 |
ylcH | yobF | b4588 | b1824 | Uncharacterized protein, DLP12 prophage. | DUF2527 family heat-induced protein. | 0.506 |
ylcH | yohO | b4588 | b4542 | Uncharacterized protein, DLP12 prophage. | Putative membrane protein; Belongs to the UPF0387 family. | 0.803 |
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