Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
flk | yhaC | b2321 | b3121 | Putative flagella assembly protein; Acts as a regulator of flagellar gene expression by modulating the protein level of the anti sigma factor FlgM upon sensing ring completion or hook elongation. Flk could inhibit FlgM secretion by acting as a braking system for the flagellar-associated type III secretion (T3S) system. Plays a role in hindering to flip the flagellar T3S specificity switch from the rod and hook-type substrates to filament-type substrates prior to hook-basal body (HBB) completion possibly by preventing interaction of FliK with FlhB (By similarity). | Pentapetide repeats-related protein. | 0.600 |
tdcR | yhaB | b3119 | b3120 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Uncharacterized protein. | 0.600 |
tdcR | yhaC | b3119 | b3121 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Pentapetide repeats-related protein. | 0.547 |
tdcR | yqeK | b3119 | b2849 | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | Uncharacterized protein. | 0.624 |
ygeG | ygeH | b2851 | b2852 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Putative transcriptional regulator; Putative invasion protein. | 0.888 |
ygeG | yhaB | b2851 | b3120 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Uncharacterized protein. | 0.603 |
ygeG | yhaC | b2851 | b3121 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Pentapetide repeats-related protein. | 0.673 |
ygeG | yqeK | b2851 | b2849 | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | Uncharacterized protein. | 0.844 |
ygeH | ygeG | b2852 | b2851 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | 0.888 |
ygeH | yhaB | b2852 | b3120 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.539 |
ygeH | yhaC | b2852 | b3121 | Putative transcriptional regulator; Putative invasion protein. | Pentapetide repeats-related protein. | 0.540 |
ygeH | yqeK | b2852 | b2849 | Putative transcriptional regulator; Putative invasion protein. | Uncharacterized protein. | 0.732 |
yhaB | tdcR | b3120 | b3119 | Uncharacterized protein. | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | 0.600 |
yhaB | ygeG | b3120 | b2851 | Uncharacterized protein. | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | 0.603 |
yhaB | ygeH | b3120 | b2852 | Uncharacterized protein. | Putative transcriptional regulator; Putative invasion protein. | 0.539 |
yhaB | yhaC | b3120 | b3121 | Uncharacterized protein. | Pentapetide repeats-related protein. | 0.859 |
yhaB | yqeK | b3120 | b2849 | Uncharacterized protein. | Uncharacterized protein. | 0.720 |
yhaC | flk | b3121 | b2321 | Pentapetide repeats-related protein. | Putative flagella assembly protein; Acts as a regulator of flagellar gene expression by modulating the protein level of the anti sigma factor FlgM upon sensing ring completion or hook elongation. Flk could inhibit FlgM secretion by acting as a braking system for the flagellar-associated type III secretion (T3S) system. Plays a role in hindering to flip the flagellar T3S specificity switch from the rod and hook-type substrates to filament-type substrates prior to hook-basal body (HBB) completion possibly by preventing interaction of FliK with FlhB (By similarity). | 0.600 |
yhaC | tdcR | b3121 | b3119 | Pentapetide repeats-related protein. | L-threonine dehydratase operon activator protein; Probable trans-acting positive activator for the tdc operon. | 0.547 |
yhaC | ygeG | b3121 | b2851 | Pentapetide repeats-related protein. | Uncharacterized protein YgeG; Pseudogene; Belongs to the LcrH/SycD chaperone family. | 0.673 |
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