STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhgEDUF4153 family putative inner membrane protein; Putative transport. (574 aa)    
Predicted Functional Partners:
yebB
DUF830 family protein; To E.coli YiiX.
  
  
 0.938
yhhA
DUF2756 family protein.
      
 0.808
yfjT
CP4-57 prophage; putative periplasmic protein; To E.coli YkfB.
      
 0.800
yfeK
Uncharacterized protein.
  
     0.762
yobH
Uncharacterized protein.
      
 0.734
cysJ
Sulfite reductase, alpha subunit, flavoprotein; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component; In the N-terminal section; belongs to the flavodoxin family.
    
 0.707
yfaL
Adhesin; Probably an autotransporter.
  
  
 0.702
ylbF
Putative anaerobic allantoin catabolic oxamate carbamoyltransferase; Putative carboxylase.
  
     0.701
csiE
Stationary phase inducible protein.
  
     0.700
yrbL
Mg(2+)-starvation-stimulated protein.
  
 
 0.699
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.