Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adeD | adeQ | b3665 | b3664 | Cryptic adenine deaminase; Protein involved in metabolic process; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | Adenine permease, high affinity; High-affinity transporter for adenine. | 0.730 |
adeD | yicN | b3665 | b3663 | Cryptic adenine deaminase; Protein involved in metabolic process; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | DUF1198 family protein. | 0.422 |
adeQ | adeD | b3664 | b3665 | Adenine permease, high affinity; High-affinity transporter for adenine. | Cryptic adenine deaminase; Protein involved in metabolic process; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | 0.730 |
adeQ | yicN | b3664 | b3663 | Adenine permease, high affinity; High-affinity transporter for adenine. | DUF1198 family protein. | 0.613 |
nepI | yicN | b3662 | b3663 | Putative transporter; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine. | DUF1198 family protein. | 0.828 |
yibN | yicN | b3611 | b3663 | Putative rhodanese-related sulfurtransferase. | DUF1198 family protein. | 0.783 |
yicN | adeD | b3663 | b3665 | DUF1198 family protein. | Cryptic adenine deaminase; Protein involved in metabolic process; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. | 0.422 |
yicN | adeQ | b3663 | b3664 | DUF1198 family protein. | Adenine permease, high affinity; High-affinity transporter for adenine. | 0.613 |
yicN | nepI | b3663 | b3662 | DUF1198 family protein. | Putative transporter; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine. | 0.828 |
yicN | yibN | b3663 | b3611 | DUF1198 family protein. | Putative rhodanese-related sulfurtransferase. | 0.783 |