STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bsmABioflm peroxide resistance protein; Involved in protection of biofilms against oxidative stress. Belongs to the BhsA/McbA family. (109 aa)    
Predicted Functional Partners:
yjfN
DUF1471 family periplasmic protein.
  
  
 0.825
rclB
Reactive chlorine species (RCS) stress resistance periplasmic protein; Probably involved in reactive chlorine species (RCS) stress resistance; Belongs to the BhsA/McbA family.
      
 0.663
yjfY
YhcN family protein, periplasmic.
      
 0.656
bhsA
Biofilm, cell surface and signaling protein; Reduces the permeability of the outer membrane to copper. Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction; Belongs to the BhsA/McbA family.
      
 0.599
yodD
Uncharacterized protein.
   
  
 0.545
pgaB
poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein; Catalyzes the N-deacetylation of poly-beta-1,6-N-acetyl-D- glucosamine (PGA), a biofilm adhesin polysaccharide. N-deacetylation promotes PGA export through the PgaA porin. Belongs to the polysaccharide deacetylase family.
      
 0.530
ygcG
TPM domain protein, putative phosphatase.
      
 0.529
ybiI
DksA-type zinc finger protein.
   
  
 0.520
mcbA
Colanic acid mucoidy stimulation protein; Affects biofilm formation and mucoidy.
      
 0.517
ychH
DUF2583 family putative inner membrane protein.
   
  
 0.510
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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