Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
osmY | yjjU | b4376 | b4377 | Salt-inducible putative ABC transporter periplasmic binding protein; Hyperosmotically inducible periplasmic protein; Protein involved in response to osmotic stress. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.817 |
osmY | ytjA | b4376 | b4568 | Salt-inducible putative ABC transporter periplasmic binding protein; Hyperosmotically inducible periplasmic protein; Protein involved in response to osmotic stress. | Uncharacterized protein. | 0.947 |
pldB | yjjU | b3825 | b4377 | Lysophospholipase L2; Protein involved in phosphorus metabolic process. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.676 |
rssA | yjjU | b1234 | b4377 | Putative patatin-like family phospholipase; Belongs to the NTE family. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.731 |
yeaP | yjjU | b1794 | b4377 | Diguanylate cyclase; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.612 |
yiiR | yiiS | b3921 | b3922 | DUF805 family putative inner membrane protein. | UPF0381 family protein; Belongs to the UPF0381 family. | 0.749 |
yiiR | yjjU | b3921 | b4377 | DUF805 family putative inner membrane protein. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.563 |
yiiS | yiiR | b3922 | b3921 | UPF0381 family protein; Belongs to the UPF0381 family. | DUF805 family putative inner membrane protein. | 0.749 |
yiiS | yjbQ | b3922 | b4056 | UPF0381 family protein; Belongs to the UPF0381 family. | Thiamine phosphate synthase; Belongs to the UPF0047 family. | 0.539 |
yiiS | yjbR | b3922 | b4057 | UPF0381 family protein; Belongs to the UPF0381 family. | DUF419 family protein. | 0.550 |
yiiS | yjjU | b3922 | b4377 | UPF0381 family protein; Belongs to the UPF0381 family. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.543 |
yjbQ | yiiS | b4056 | b3922 | Thiamine phosphate synthase; Belongs to the UPF0047 family. | UPF0381 family protein; Belongs to the UPF0381 family. | 0.539 |
yjbQ | yjbR | b4056 | b4057 | Thiamine phosphate synthase; Belongs to the UPF0047 family. | DUF419 family protein. | 0.970 |
yjbQ | yjjU | b4056 | b4377 | Thiamine phosphate synthase; Belongs to the UPF0047 family. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.594 |
yjbR | yiiS | b4057 | b3922 | DUF419 family protein. | UPF0381 family protein; Belongs to the UPF0381 family. | 0.550 |
yjbR | yjbQ | b4057 | b4056 | DUF419 family protein. | Thiamine phosphate synthase; Belongs to the UPF0047 family. | 0.970 |
yjbR | yjjU | b4057 | b4377 | DUF419 family protein. | Putative patatin-like family phospholipase; Probable lipid hydrolase. | 0.610 |
yjjU | osmY | b4377 | b4376 | Putative patatin-like family phospholipase; Probable lipid hydrolase. | Salt-inducible putative ABC transporter periplasmic binding protein; Hyperosmotically inducible periplasmic protein; Protein involved in response to osmotic stress. | 0.817 |
yjjU | pldB | b4377 | b3825 | Putative patatin-like family phospholipase; Probable lipid hydrolase. | Lysophospholipase L2; Protein involved in phosphorus metabolic process. | 0.676 |
yjjU | rssA | b4377 | b1234 | Putative patatin-like family phospholipase; Probable lipid hydrolase. | Putative patatin-like family phospholipase; Belongs to the NTE family. | 0.731 |
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