STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjjUPutative patatin-like family phospholipase; Probable lipid hydrolase. (357 aa)    
Predicted Functional Partners:
yjjV
Putative DNase; Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family.
  
    0.943
osmY
Salt-inducible putative ABC transporter periplasmic binding protein; Hyperosmotically inducible periplasmic protein; Protein involved in response to osmotic stress.
 
    0.817
rssA
Putative patatin-like family phospholipase; Belongs to the NTE family.
  
  
 0.731
pldB
Lysophospholipase L2; Protein involved in phosphorus metabolic process.
 
   
 0.676
yeaP
Diguanylate cyclase; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria.
   
    0.612
yjbR
DUF419 family protein.
   
  
 0.610
yjbQ
Thiamine phosphate synthase; Belongs to the UPF0047 family.
  
  
 0.594
ytjA
Uncharacterized protein.
     
 0.584
yiiR
DUF805 family putative inner membrane protein.
  
     0.563
yiiS
UPF0381 family protein; Belongs to the UPF0381 family.
   
  
 0.543
Your Current Organism:
Escherichia coli K12
NCBI taxonomy Id: 511145
Other names: E. coli str. K-12 substr. MG1655, Escherichia coli MG1655, Escherichia coli str. K-12 substr. MG1655, Escherichia coli str. K12 substr. MG1655, Escherichia coli str. MG1655, Escherichia coli strain MG1655
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