Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cysB | yciX | b1275 | b4523 | N-acetylserine-responsive cysteine regulon transcriptional activator; This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription. | Uncharacterized protein. | 0.407 |
cysB | ymiA | b1275 | b4522 | N-acetylserine-responsive cysteine regulon transcriptional activator; This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription. | Uncharacterized protein. | 0.407 |
yciX | cysB | b4523 | b1275 | Uncharacterized protein. | N-acetylserine-responsive cysteine regulon transcriptional activator; This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for CysB is N-acetylserine. CysB inhibits its own transcription. | 0.407 |
yciX | yciY | b4523 | b4595 | Uncharacterized protein. | Uncharacterized protein; Belongs to the YciY family. | 0.529 |
yciX | ycjY | b4523 | b1327 | Uncharacterized protein. | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | 0.645 |
yciX | yecA | b4523 | b1908 | Uncharacterized protein. | UPF0149 family protein. | 0.644 |
yciX | yedI | b4523 | b1958 | Uncharacterized protein. | DUF808 family inner membrane protein. | 0.456 |
yciX | yfbK | b4523 | b2270 | Uncharacterized protein. | Von Willebrand factor domain putative lipoprotein; To Synechocystis PCC 6803 sll0103. | 0.541 |
yciX | yjfN | b4523 | b4188 | Uncharacterized protein. | DUF1471 family periplasmic protein. | 0.454 |
yciX | yjjQ | b4523 | b4365 | Uncharacterized protein. | Putative regulator. | 0.459 |
yciX | ymiA | b4523 | b4522 | Uncharacterized protein. | Uncharacterized protein. | 0.953 |
yciX | yncJ | b4523 | b1436 | Uncharacterized protein. | Uncharacterized protein. | 0.524 |
yciY | yciX | b4595 | b4523 | Uncharacterized protein; Belongs to the YciY family. | Uncharacterized protein. | 0.529 |
yciY | ycjY | b4595 | b1327 | Uncharacterized protein; Belongs to the YciY family. | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | 0.600 |
yciY | yedI | b4595 | b1958 | Uncharacterized protein; Belongs to the YciY family. | DUF808 family inner membrane protein. | 0.807 |
yciY | ymiA | b4595 | b4522 | Uncharacterized protein; Belongs to the YciY family. | Uncharacterized protein. | 0.455 |
ycjY | yciX | b1327 | b4523 | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | Uncharacterized protein. | 0.645 |
ycjY | yciY | b1327 | b4595 | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | Uncharacterized protein; Belongs to the YciY family. | 0.600 |
ycjY | yedI | b1327 | b1958 | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | DUF808 family inner membrane protein. | 0.517 |
ycjY | ymiA | b1327 | b4522 | Uncharacterized protein YcjY; Pseudogene fragment, MhpC family. | Uncharacterized protein. | 0.544 |
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