Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
nepI | yicS | b3662 | b4555 | Putative transporter; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine. | Putative periplasmic protein. | 0.457 |
nlpA | yicS | b3661 | b4555 | Cytoplasmic membrane lipoprotein-28; Lipoprotein-28. | Putative periplasmic protein. | 0.478 |
yebF | yicS | b1847 | b4555 | Extracellular Colicin M immunity family protein. | Putative periplasmic protein. | 0.530 |
yggP | yicS | b4465 | b4555 | Putative Zn-binding dehydrogenase; To K.pneumoniae SorE. | Putative periplasmic protein. | 0.407 |
yibT | yicS | b4554 | b4555 | Uncharacterized protein. | Putative periplasmic protein. | 0.528 |
yicS | nepI | b4555 | b3662 | Putative periplasmic protein. | Putative transporter; Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and especially inosine. Involved in the resistance to 6-mercaptopurine. | 0.457 |
yicS | nlpA | b4555 | b3661 | Putative periplasmic protein. | Cytoplasmic membrane lipoprotein-28; Lipoprotein-28. | 0.478 |
yicS | yebF | b4555 | b1847 | Putative periplasmic protein. | Extracellular Colicin M immunity family protein. | 0.530 |
yicS | yggP | b4555 | b4465 | Putative periplasmic protein. | Putative Zn-binding dehydrogenase; To K.pneumoniae SorE. | 0.407 |
yicS | yibT | b4555 | b4554 | Putative periplasmic protein. | Uncharacterized protein. | 0.528 |