Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ymgD | ymgG | b1171 | b1172 | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | UPF0757 family protein. | 0.993 |
ymgD | ymgI | b1171 | b4593 | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | Uncharacterized protein. | 0.773 |
ymgD | ymgJ | b1171 | b4594 | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | Uncharacterized protein. | 0.544 |
ymgG | ymgD | b1172 | b1171 | UPF0757 family protein. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.993 |
ymgG | ymgI | b1172 | b4593 | UPF0757 family protein. | Uncharacterized protein. | 0.892 |
ymgG | ymgJ | b1172 | b4594 | UPF0757 family protein. | Uncharacterized protein. | 0.545 |
ymgI | ymgD | b4593 | b1171 | Uncharacterized protein. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.773 |
ymgI | ymgG | b4593 | b1172 | Uncharacterized protein. | UPF0757 family protein. | 0.892 |
ymgI | ymgJ | b4593 | b4594 | Uncharacterized protein. | Uncharacterized protein. | 0.545 |
ymgJ | ymgD | b4594 | b1171 | Uncharacterized protein. | Uncharacterized protein YmgD; Pseudogene; putative ATP-binding component of a transport system. | 0.544 |
ymgJ | ymgG | b4594 | b1172 | Uncharacterized protein. | UPF0757 family protein. | 0.545 |
ymgJ | ymgI | b4594 | b4593 | Uncharacterized protein. | Uncharacterized protein. | 0.545 |