Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acrZ | yoaK | b0762 | b4676 | AcrAB-TolC efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export. | Inner membrane-associated protein. | 0.600 |
acrZ | yqgB | b0762 | b2939 | AcrAB-TolC efflux pump accessory protein, membrane-associated; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export. | Uncharacterized protein; Belongs to the YqgB family. | 0.519 |
ydjA | yoaJ | b1765 | b4675 | Putative oxidoreductase; Belongs to the nitroreductase family. | Inner membrane-associated protein. | 0.526 |
ydjA | yoaK | b1765 | b4676 | Putative oxidoreductase; Belongs to the nitroreductase family. | Inner membrane-associated protein. | 0.600 |
ydjA | yshB | b1765 | b4686 | Putative oxidoreductase; Belongs to the nitroreductase family. | Uncharacterized protein. | 0.620 |
yeaP | yoaJ | b1794 | b4675 | Diguanylate cyclase; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. | Inner membrane-associated protein. | 0.744 |
yeaP | yoaK | b1794 | b4676 | Diguanylate cyclase; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. | Inner membrane-associated protein. | 0.751 |
ynhF | yoaJ | b4602 | b4675 | Stress response membrane. | Inner membrane-associated protein. | 0.529 |
ynhF | yoaK | b4602 | b4676 | Stress response membrane. | Inner membrane-associated protein. | 0.621 |
ynhF | ypdK | b4602 | b4680 | Stress response membrane. | Inner membrane protein. | 0.620 |
ynhF | ypfM | b4602 | b4606 | Stress response membrane. | Stress-induced small enterobacterial protein. | 0.529 |
ynhF | yqfG | b4602 | b4684 | Stress response membrane. | Uncharacterized protein. | 0.622 |
ynhF | yqgB | b4602 | b2939 | Stress response membrane. | Uncharacterized protein; Belongs to the YqgB family. | 0.525 |
ynhF | yshB | b4602 | b4686 | Stress response membrane. | Uncharacterized protein. | 0.738 |
yoaJ | ydjA | b4675 | b1765 | Inner membrane-associated protein. | Putative oxidoreductase; Belongs to the nitroreductase family. | 0.526 |
yoaJ | yeaP | b4675 | b1794 | Inner membrane-associated protein. | Diguanylate cyclase; Catalyzes the synthesis of cyclic-di-GMP (c-di-GMP) via the condensation of 2 GTP molecules. Cyclic-di-GMP is a second messenger which controls cell surface-associated traits in bacteria. | 0.744 |
yoaJ | ynhF | b4675 | b4602 | Inner membrane-associated protein. | Stress response membrane. | 0.529 |
yoaJ | yoaK | b4675 | b4676 | Inner membrane-associated protein. | Inner membrane-associated protein. | 0.956 |
yoaJ | ypdK | b4675 | b4680 | Inner membrane-associated protein. | Inner membrane protein. | 0.624 |
yoaJ | ypfM | b4675 | b4606 | Inner membrane-associated protein. | Stress-induced small enterobacterial protein. | 0.543 |
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