Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F11_orf84 | dnaN | MPN_406 | MPN_001 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.436 |
| F11_orf84 | rplC | MPN_406 | MPN_165 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.981 |
| F11_orf84 | rplK | MPN_406 | MPN_219 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.984 |
| F11_orf84 | rplM | MPN_406 | MPN_617 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.988 |
| F11_orf84 | rplN | MPN_406 | MPN_175 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.922 |
| F11_orf84 | rplO | MPN_406 | MPN_183 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.981 |
| F11_orf84 | rplQ | MPN_406 | MPN_192 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Ribosomal protein L17; MPN192(new), 640(Himmelreich et al., 1996). | 0.996 |
| F11_orf84 | thdF | MPN_406 | MPN_008 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34. | 0.932 |
| F11_orf84 | xdj1 | MPN_406 | MPN_002 | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | DnaJ-like protein; MPN002(new), 152(Himmelreich et al., 1996). | 0.821 |
| dnaK | dnaN | MPN_434 | MPN_001 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.461 |
| dnaK | rplC | MPN_434 | MPN_165 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.771 |
| dnaK | rplK | MPN_434 | MPN_219 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.722 |
| dnaK | rplM | MPN_434 | MPN_617 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.810 |
| dnaK | rplN | MPN_434 | MPN_175 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.787 |
| dnaK | rplO | MPN_434 | MPN_183 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.571 |
| dnaK | xdj1 | MPN_434 | MPN_002 | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DnaJ-like protein; MPN002(new), 152(Himmelreich et al., 1996). | 0.972 |
| dnaN | F11_orf84 | MPN_001 | MPN_406 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Acyl carrier protein-like protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.436 |
| dnaN | dnaK | MPN_001 | MPN_434 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.461 |
| dnaN | thdF | MPN_001 | MPN_008 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Thiophene and furan oxidation protein; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34. | 0.716 |
| dnaN | xdj1 | MPN_001 | MPN_002 | DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DnaJ-like protein; MPN002(new), 152(Himmelreich et al., 1996). | 0.848 |
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