node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C09_orf718 | rplF | MPN_110 | MPN_180 | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.457 |
C09_orf718 | rpoA | MPN_110 | MPN_191 | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
C09_orf718 | rpoB | MPN_110 | MPN_516 | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
C09_orf718 | rpoC | MPN_110 | MPN_515 | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.926 |
C09_orf718 | yb95 | MPN_110 | MPN_020 | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | Helicase-like protein; MPN020(new), 134(Himmelreich et al., 1996); Belongs to the SNF2/RAD54 helicase family. | 0.908 |
greA | nusA | MPN_401 | MPN_154 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | 0.413 |
greA | rpoA | MPN_401 | MPN_191 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
greA | rpoB | MPN_401 | MPN_516 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.998 |
greA | rpoC | MPN_401 | MPN_515 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
greA | sigA | MPN_401 | MPN_352 | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | Sigma-70 Factor Family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.680 |
nusA | greA | MPN_154 | MPN_401 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | 0.413 |
nusA | rplF | MPN_154 | MPN_180 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.902 |
nusA | rplK | MPN_154 | MPN_219 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.990 |
nusA | rpoA | MPN_154 | MPN_191 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | RNA polymerase alpha core subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
nusA | rpoB | MPN_154 | MPN_516 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
nusA | rpoC | MPN_154 | MPN_515 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
nusA | rpsQ | MPN_154 | MPN_174 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.842 |
nusA | sigA | MPN_154 | MPN_352 | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | Sigma-70 Factor Family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.724 |
rplF | C09_orf718 | MPN_180 | MPN_110 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Conserved hypothetical protein; MPN110(new), 045(Himmelreich et al., 1996). | 0.457 |
rplF | nusA | MPN_180 | MPN_154 | Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | N-utilization substance protein A-like protein; Participates in both transcription termination and antitermination. | 0.902 |