MDS_2413 protein (Pseudomonas mendocina NK01)

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Score

MDS_2413

ATP-dependent DNA ligase. (842 aa)

Predicted Functional Partners:

MDS_2412

0.992

polA

0.918

MDS_0002

0.911

MDS_1900

0.837

MDS_2410

0.810

MDS_2515

0.749

MDS_2516

0.737

MDS_0040

0.724

MDS_3838

0.708

holB

0.679

Your Current Organism:

Pseudomonas mendocina NK01

NCBI taxonomy Id: 1001585
Other names: P. mendocina NK-01, Pseudomonas mendocina NK-01, Pseudomonas mendocina str. NK-01, Pseudomonas mendocina strain NK-01

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MDS_0002	MDS_1900	MDS_0002	MDS_1900	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA topoisomerase.	0.429
MDS_0002	MDS_2413	MDS_0002	MDS_2413	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	ATP-dependent DNA ligase.	0.911
MDS_0002	MDS_2516	MDS_0002	MDS_2516	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	ATP-dependent DNA ligase.	0.906
MDS_0002	MDS_3838	MDS_0002	MDS_3838	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase II.	0.986
MDS_0002	holB	MDS_0002	MDS_1688	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase III subunit delta'.	0.998
MDS_0002	polA	MDS_0002	MDS_0170	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.995
MDS_0040	MDS_2413	MDS_0040	MDS_2413	D,D-heptose 1,7-bisphosphate phosphatase.	ATP-dependent DNA ligase.	0.724
MDS_0040	MDS_2516	MDS_0040	MDS_2516	D,D-heptose 1,7-bisphosphate phosphatase.	ATP-dependent DNA ligase.	0.685
MDS_1900	MDS_0002	MDS_1900	MDS_0002	DNA topoisomerase.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.429
MDS_1900	MDS_2410	MDS_1900	MDS_2410	DNA topoisomerase.	Hypothetical protein.	0.536
MDS_1900	MDS_2412	MDS_1900	MDS_2412	DNA topoisomerase.	Ku domain-containing protein.	0.702
MDS_1900	MDS_2413	MDS_1900	MDS_2413	DNA topoisomerase.	ATP-dependent DNA ligase.	0.837
MDS_1900	MDS_2515	MDS_1900	MDS_2515	DNA topoisomerase.	RNA procession exonuclease-like protein.	0.527
MDS_1900	MDS_2516	MDS_1900	MDS_2516	DNA topoisomerase.	ATP-dependent DNA ligase.	0.708
MDS_1900	MDS_3838	MDS_1900	MDS_3838	DNA topoisomerase.	DNA polymerase II.	0.566
MDS_1900	polA	MDS_1900	MDS_0170	DNA topoisomerase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.491
MDS_2410	MDS_1900	MDS_2410	MDS_1900	Hypothetical protein.	DNA topoisomerase.	0.536
MDS_2410	MDS_2412	MDS_2410	MDS_2412	Hypothetical protein.	Ku domain-containing protein.	0.711
MDS_2410	MDS_2413	MDS_2410	MDS_2413	Hypothetical protein.	ATP-dependent DNA ligase.	0.810
MDS_2412	MDS_1900	MDS_2412	MDS_1900	Ku domain-containing protein.	DNA topoisomerase.	0.702