STRINGSTRING
Pcdhb21 Pcdhb21 Pcdhb20 Pcdhb20 Pcdhb17 Pcdhb17 Pcdhb16 Pcdhb16 Pcdhb19 Pcdhb19 Pcdhb18 Pcdhb18 Zfp804b Zfp804b Pcdhb15 Pcdhb15 Pcdhb11 Pcdhb11 Rassf4 Rassf4 Rnf148 Rnf148
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcdhb21Protocadherin beta 21. (774 aa)    
Predicted Functional Partners:
Pcdhb20
Protocadherin beta 20.
  
  
0.865
Pcdhb17
Protocadherin beta 17.
  
  
0.860
Pcdhb16
Protocadherin beta 16.
  
  
0.844
Pcdhb19
Protocadherin beta 19.
  
  
0.829
Pcdhb18
Protocadherin beta-18; Potential calcium-dependent cell-adhesion protein.
  
  
0.816
Zfp804b
Zinc finger protein 804B.
      
 0.609
Pcdhb15
Protocadherin beta 15.
  
  
0.531
Pcdhb11
Protocadherin beta 11.
  
  
0.476
Rassf4
Ras association domain-containing protein 4; Potential tumor suppressor. May act as a KRAS effector protein. May promote apoptosis and cell cycle arrest.
      
 0.451
Rnf148
RING finger protein 148.
      
 0.420
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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