STRINGSTRING
Fmr1nb Fmr1nb 4933436I01Rik 4933436I01Rik Aff2 Aff2 Rhox13 Rhox13 Gm14692 Gm14692 Gm1140 Gm1140 Nxf2 Nxf2 Ctag2 Ctag2 4930447F04Rik 4930447F04Rik Swt1 Swt1 Triml2 Triml2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fmr1nbFragile X mental retardation 1 neighbor protein. (238 aa)    
Predicted Functional Partners:
4933436I01Rik
RIKEN cDNA 4933436I01 gene.
   
  
 0.696
Aff2
AF4/FMR2 family member 2; RNA-binding protein. Might be involved in alternative splicing regulation through an interaction with G-quartet RNA structure; Belongs to the AF4 family.
   
  
 0.671
Rhox13
Homeobox protein Rhox13; Probable transcription factor.
   
  
 0.652
Gm14692
Predicted gene 14692.
   
  
 0.650
Gm1140
Predicted gene 1140.
   
  
 0.650
Nxf2
Nuclear RNA export factor 2.
   
  
 0.632
Ctag2
Cancer/testis antigen 2.
   
  
 0.622
4930447F04Rik
RIKEN cDNA 4930447F04 gene.
   
  
 0.608
Swt1
Transcriptional protein SWT1.
      
 0.592
Triml2
Tripartite motif family-like 2.
   
  
 0.564
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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