STRINGSTRING
Yipf3 Yipf3 Yipf4 Yipf4 Yipf2 Yipf2 Yipf1 Yipf1 Yipf7 Yipf7 Yipf5 Yipf5 Yipf6 Yipf6 Yif1a Yif1a Slc38a7 Slc38a7 9130008F23Rik 9130008F23Rik Tm9sf3 Tm9sf3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yipf3Protein YIPF3, N-terminally processed; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (By similarity); Belongs to the YIP1 family. (347 aa)    
Predicted Functional Partners:
Yipf4
Protein YIPF4; Involved in the maintenance of the Golgi structure. Belongs to the YIP1 family.
   
 
 0.899
Yipf2
Protein YIPF2; Belongs to the YIP1 family.
   
  
 0.829
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
  
 0.775
Yipf7
Protein YIPF7; Belongs to the YIP1 family.
   
 
 0.771
Yipf5
Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi; Belongs to the YIP1 family.
   
 
 0.750
Yipf6
Protein YIPF6; May be required for stable YIPF1 and YIPF2 protein expression.
   
 
 0.730
Yif1a
Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi.
   
  
 0.603
Slc38a7
Putative sodium-coupled neutral amino acid transporter 7; Mediates sodium-dependent transport of amino acids. Substrate preference is ranked l-glutamine > l-histidine > l-serine > l-alanine > l-asparagine > l-aspartic acid > l-glutamic acid > l-methionine > l- leucine > l-glycine.
   
  
 0.519
9130008F23Rik
RIKEN cDNA 9130008F23 gene.
      
 0.489
Tm9sf3
Transmembrane 9 superfamily member 3.
   
   0.489
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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