Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arf6 | Psd3 | ENSMUSP00000055862 | ENSMUSP00000096293 | ADP-ribosylation factor 6; GTP-binding protein involved in protein trafficking that regulates endocytic recycling and cytoskeleton remodeling. Required for normal completion of mitotic cytokinesis. Involved in the regulation of dendritic spine development, contributing to the regulation of dendritic branching and filopodia extension. Plays an important role in membrane trafficking, during junctional remodeling and epithelial polarization. Regulates surface levels of adherens junction proteins such as CDH1. Required for NTRK1 sorting to the recycling pathway from early endosomes (By sim [...] | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.734 |
Dcun1d4 | Psd3 | ENSMUSP00000084427 | ENSMUSP00000096293 | DCN1-like protein 4. | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.420 |
Pigg | Psd3 | ENSMUSP00000113818 | ENSMUSP00000096293 | Phosphatidylinositol glycan anchor biosynthesis, class G. | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.467 |
Pigg | Tmem161b | ENSMUSP00000113818 | ENSMUSP00000055208 | Phosphatidylinositol glycan anchor biosynthesis, class G. | Transmembrane protein 161B. | 0.472 |
Psd3 | Arf6 | ENSMUSP00000096293 | ENSMUSP00000055862 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | ADP-ribosylation factor 6; GTP-binding protein involved in protein trafficking that regulates endocytic recycling and cytoskeleton remodeling. Required for normal completion of mitotic cytokinesis. Involved in the regulation of dendritic spine development, contributing to the regulation of dendritic branching and filopodia extension. Plays an important role in membrane trafficking, during junctional remodeling and epithelial polarization. Regulates surface levels of adherens junction proteins such as CDH1. Required for NTRK1 sorting to the recycling pathway from early endosomes (By sim [...] | 0.734 |
Psd3 | Dcun1d4 | ENSMUSP00000096293 | ENSMUSP00000084427 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | DCN1-like protein 4. | 0.420 |
Psd3 | Pigg | ENSMUSP00000096293 | ENSMUSP00000113818 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | Phosphatidylinositol glycan anchor biosynthesis, class G. | 0.467 |
Psd3 | Tmco4 | ENSMUSP00000096293 | ENSMUSP00000059320 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | Transmembrane and coiled-coil domain-containing protein 4; Belongs to the TMCO4 family. | 0.538 |
Psd3 | Tmem161b | ENSMUSP00000096293 | ENSMUSP00000055208 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | Transmembrane protein 161B. | 0.461 |
Psd3 | Zswim5 | ENSMUSP00000096293 | ENSMUSP00000049474 | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | Zinc finger SWIM domain-containing protein 5. | 0.432 |
Tmco4 | Psd3 | ENSMUSP00000059320 | ENSMUSP00000096293 | Transmembrane and coiled-coil domain-containing protein 4; Belongs to the TMCO4 family. | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.538 |
Tmem161b | Pigg | ENSMUSP00000055208 | ENSMUSP00000113818 | Transmembrane protein 161B. | Phosphatidylinositol glycan anchor biosynthesis, class G. | 0.472 |
Tmem161b | Psd3 | ENSMUSP00000055208 | ENSMUSP00000096293 | Transmembrane protein 161B. | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.461 |
Zswim5 | Psd3 | ENSMUSP00000049474 | ENSMUSP00000096293 | Zinc finger SWIM domain-containing protein 5. | PH and SEC7 domain-containing protein 3; Guanine nucleotide exchange factor for ARF6. | 0.432 |