STRINGSTRING
Rpl3l Rpl3l Rpl5 Rpl5 Rpl8 Rpl8 Rpl11 Rpl11 Rpl4 Rpl4 Rpl12 Rpl12 Rpl15 Rpl15 Rpl6 Rpl6 Rplp0 Rplp0 Rpl38 Rpl38 Rpl30 Rpl30
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpl3lRibosomal protein L3-like; Belongs to the universal ribosomal protein uL3 family. (407 aa)    
Predicted Functional Partners:
Rpl5
60S ribosomal protein L5; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]
  
 0.990
Rpl8
60S ribosomal protein L8; Component of the large ribosomal subunit. Belongs to the universal ribosomal protein uL2 family.
  
 0.990
Rpl11
60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]
  
 0.989
Rpl4
60S ribosomal protein L4; Belongs to the universal ribosomal protein uL4 family.
  
 0.988
Rpl12
60S ribosomal protein L12; Binds directly to 26S ribosomal RNA.
  
 0.988
Rpl15
60S ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.987
Rpl6
60S ribosomal protein L6; Component of the large ribosomal subunit.
  
 0.986
Rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.986
Rpl38
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.986
Rpl30
60S ribosomal protein L30; Belongs to the eukaryotic ribosomal protein eL30 family.
   
 0.986
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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