STRINGSTRING
Yipf4 Yipf4 Yipf3 Yipf3 Yipf2 Yipf2 Yipf1 Yipf1 Yif1a Yif1a LOC103689986 LOC103689986 Yif1b Yif1b Yipf5 Yipf5 Tmem41a Tmem41a Slc66a3 Slc66a3 Unc50 Unc50
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yipf4Protein YIPF4; Involved in the maintenance of the Golgi structure. (246 aa)    
Predicted Functional Partners:
Yipf3
Protein YIPF3; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (By similarity).
   
 
 0.928
Yipf2
Protein YIPF2; Belongs to the YIP1 family.
   
 
 0.925
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
 
 0.902
Yif1a
Yip1-interacting factor homolog A, membrane-trafficking protein.
   
 
 0.858
LOC103689986
Protein YIF1B.
   
 
 0.747
Yif1b
Protein YIF1B.
   
 
 0.747
Yipf5
Protein YIPF5; Plays a role in transport between endoplasmic reticulum and Golgi.
   
  
 0.703
Tmem41a
Transmembrane protein 41a.
      
 0.671
Slc66a3
PQ loop repeat containing 3.
   
  
 0.626
Unc50
Protein unc-50 homolog; May be involved in cell surface expression of neuronal nicotinic receptors. Binds RNA.
   
  
 0.621
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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