STRINGSTRING
Xkr6 Xkr6 Lca5l Lca5l Ccm2 Ccm2 Tmem63b Tmem63b Mtmr9 Mtmr9 Psmg1 Psmg1 Sh3bgr Sh3bgr Tnrc18 Tnrc18 Unc80 Unc80 Zfp397 Zfp397 H2ac21 H2ac21
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xkr6XK-related protein 6. (636 aa)    
Predicted Functional Partners:
Lca5l
Lebercilin LCA5-like.
      
 0.826
Ccm2
CCM2 scaffold protein.
 
    
 0.742
Tmem63b
Transmembrane protein 63B.
      
 0.717
Mtmr9
Myotubularin-related protein 9.
      
 0.697
Psmg1
Down syndrome critical region homolog 2 (Human) (Predicted), isoform CRA_b.
      
 0.661
Sh3bgr
Similar to putative SH3BGR protein (Predicted).
      
 0.626
Tnrc18
Trinucleotide repeat-containing 18.
      
 0.625
Unc80
Unc-80 homolog, NALCN channel complex subunit.
      
 0.616
Zfp397
Zinc finger protein 397.
      
 0.614
H2ac21
Histone H2A; Belongs to the histone H2A family.
      
 0.582
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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