Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bms1 | Zc3h18 | ENSRNOP00000008741 | ENSRNOP00000048376 | BMS1 ribosome biogenesis factor. | Zinc finger CCCH domain-containing protein 18. | 0.590 |
Fryl | Lemd2 | ENSRNOP00000003061 | ENSRNOP00000036495 | FRY-like transcription coactivator. | LEM domain nuclear envelope protein 2. | 0.421 |
Fryl | Slain2 | ENSRNOP00000003061 | ENSRNOP00000003087 | FRY-like transcription coactivator. | Similar to RIKEN cDNA 5033405K12 (Predicted). | 0.504 |
Fryl | Tmem132d | ENSRNOP00000003061 | ENSRNOP00000011181 | FRY-like transcription coactivator. | Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family. | 0.500 |
Fryl | Zc3h18 | ENSRNOP00000003061 | ENSRNOP00000048376 | FRY-like transcription coactivator. | Zinc finger CCCH domain-containing protein 18. | 0.615 |
Hmgn2 | Zc3h18 | ENSRNOP00000074978 | ENSRNOP00000048376 | Non-histone chromosomal protein HMG-17; Binds to the inner side of the nucleosomal DNA thus altering the interaction between the DNA and the histone octamer. May be involved in the process which maintains transcribable genes in a unique chromatin conformation (By similarity). | Zinc finger CCCH domain-containing protein 18. | 0.554 |
Lemd2 | Fryl | ENSRNOP00000036495 | ENSRNOP00000003061 | LEM domain nuclear envelope protein 2. | FRY-like transcription coactivator. | 0.421 |
Lemd2 | Slain2 | ENSRNOP00000036495 | ENSRNOP00000003087 | LEM domain nuclear envelope protein 2. | Similar to RIKEN cDNA 5033405K12 (Predicted). | 0.449 |
Lemd2 | Tmem132d | ENSRNOP00000036495 | ENSRNOP00000011181 | LEM domain nuclear envelope protein 2. | Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family. | 0.403 |
Lemd2 | Zc3h18 | ENSRNOP00000036495 | ENSRNOP00000048376 | LEM domain nuclear envelope protein 2. | Zinc finger CCCH domain-containing protein 18. | 0.619 |
Slain2 | Fryl | ENSRNOP00000003087 | ENSRNOP00000003061 | Similar to RIKEN cDNA 5033405K12 (Predicted). | FRY-like transcription coactivator. | 0.504 |
Slain2 | Lemd2 | ENSRNOP00000003087 | ENSRNOP00000036495 | Similar to RIKEN cDNA 5033405K12 (Predicted). | LEM domain nuclear envelope protein 2. | 0.449 |
Slain2 | Tmem132d | ENSRNOP00000003087 | ENSRNOP00000011181 | Similar to RIKEN cDNA 5033405K12 (Predicted). | Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family. | 0.477 |
Slain2 | Zc3h18 | ENSRNOP00000003087 | ENSRNOP00000048376 | Similar to RIKEN cDNA 5033405K12 (Predicted). | Zinc finger CCCH domain-containing protein 18. | 0.736 |
Srrm2 | Zc3h18 | ENSRNOP00000072307 | ENSRNOP00000048376 | Serine/arginine repetitive matrix 2. | Zinc finger CCCH domain-containing protein 18. | 0.583 |
Srrt | Zc3h18 | ENSRNOP00000065372 | ENSRNOP00000048376 | ARS2 domain-containing protein. | Zinc finger CCCH domain-containing protein 18. | 0.556 |
Tcof1 | Zc3h18 | ENSRNOP00000045755 | ENSRNOP00000048376 | Treacle ribosome biogenesis factor 1. | Zinc finger CCCH domain-containing protein 18. | 0.592 |
Thoc2 | Zc3h18 | ENSRNOP00000074749 | ENSRNOP00000048376 | THO complex 2. | Zinc finger CCCH domain-containing protein 18. | 0.582 |
Tmem132d | Fryl | ENSRNOP00000011181 | ENSRNOP00000003061 | Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family. | FRY-like transcription coactivator. | 0.500 |
Tmem132d | Lemd2 | ENSRNOP00000011181 | ENSRNOP00000036495 | Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family. | LEM domain nuclear envelope protein 2. | 0.403 |
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