STRINGSTRING
ENSRNOP00000065656 ENSRNOP00000065656 Zcchc7 Zcchc7 Klhl8 Klhl8 Dydc2 Dydc2 Gspt2 Gspt2 LOC103692168 LOC103692168 Lbx2 Lbx2 Polr1c Polr1c St6galnac2 St6galnac2 Trmt11 Trmt11 Zmat1 Zmat1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSRNOP00000065656Zinc finger protein 260. (407 aa)    
Predicted Functional Partners:
Zcchc7
Zinc finger CCHC domain-containing protein 7.
    
 
 0.619
Klhl8
Kelch-like family member 8.
    
 
 0.587
Dydc2
DPY30 domain-containing 2.
    
 
 0.530
Gspt2
G1 to S phase transition 2.
      
 0.510
LOC103692168
Transcription factor LBX2.
      
 0.490
Lbx2
Ladybird homeobox 2.
      
 0.490
Polr1c
RNA polymerase I and III subunit C.
    
 
 0.479
St6galnac2
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.463
Trmt11
tRNA (guanine(10)-N2)-methyltransferase homolog; Catalytic subunit of an S-adenosyl-L-methionine-dependent tRNA methyltransferase complex that mediates the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNAs.
      
 0.463
Zmat1
Zinc finger, matrin-type 1.
      
 0.457
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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