Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09873.1 | ABD09874.1 | Francci3_0487 | Francci3_0488 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.997 |
ABD09873.1 | ABD09894.1 | Francci3_0487 | Francci3_0510 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | Putative secreted protein. | 0.506 |
ABD09873.1 | ABD13129.1 | Francci3_0487 | Francci3_3778 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.654 |
ABD09873.1 | hemA | Francci3_0487 | Francci3_0485 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.992 |
ABD09873.1 | hemC | Francci3_0487 | Francci3_0486 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
ABD09873.1 | hemL | Francci3_0487 | Francci3_0507 | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.759 |
ABD09874.1 | ABD09873.1 | Francci3_0488 | Francci3_0487 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | 0.997 |
ABD09874.1 | ABD09894.1 | Francci3_0488 | Francci3_0510 | Porphobilinogen synthase; Belongs to the ALAD family. | Putative secreted protein. | 0.400 |
ABD09874.1 | ABD13129.1 | Francci3_0488 | Francci3_3778 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.991 |
ABD09874.1 | hemA | Francci3_0488 | Francci3_0485 | Porphobilinogen synthase; Belongs to the ALAD family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.991 |
ABD09874.1 | hemC | Francci3_0488 | Francci3_0486 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
ABD09874.1 | hemL | Francci3_0488 | Francci3_0507 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.991 |
ABD09892.1 | ABD09893.1 | Francci3_0508 | Francci3_0509 | Phosphoglycerate mutase. | 23S rRNA m(1)G-748 methyltransferase. | 0.833 |
ABD09892.1 | ABD09894.1 | Francci3_0508 | Francci3_0510 | Phosphoglycerate mutase. | Putative secreted protein. | 0.956 |
ABD09892.1 | ABD13129.1 | Francci3_0508 | Francci3_3778 | Phosphoglycerate mutase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.666 |
ABD09892.1 | hemL | Francci3_0508 | Francci3_0507 | Phosphoglycerate mutase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.931 |
ABD09893.1 | ABD09892.1 | Francci3_0509 | Francci3_0508 | 23S rRNA m(1)G-748 methyltransferase. | Phosphoglycerate mutase. | 0.833 |
ABD09893.1 | ABD09894.1 | Francci3_0509 | Francci3_0510 | 23S rRNA m(1)G-748 methyltransferase. | Putative secreted protein. | 0.449 |
ABD09893.1 | hemL | Francci3_0509 | Francci3_0507 | 23S rRNA m(1)G-748 methyltransferase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.790 |
ABD09894.1 | ABD09873.1 | Francci3_0510 | Francci3_0487 | Putative secreted protein. | uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase. | 0.506 |
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