Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABD09702.1 | ABD10178.1 | Francci3_0315 | Francci3_0794 | L-glutamine synthetase. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.937 |
ABD09702.1 | ABD12499.1 | Francci3_0315 | Francci3_3142 | L-glutamine synthetase. | L-glutamine synthetase. | 0.932 |
ABD09702.1 | ABD12500.1 | Francci3_0315 | Francci3_3143 | L-glutamine synthetase. | L-glutamine synthetase. | 0.919 |
ABD09702.1 | ABD13832.1 | Francci3_0315 | Francci3_4486 | L-glutamine synthetase. | Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.911 |
ABD09702.1 | ABD13833.1 | Francci3_0315 | Francci3_4487 | L-glutamine synthetase. | Mo-nitrogenase MoFe protein subunit NifD precursor. | 0.911 |
ABD09702.1 | nifH | Francci3_0315 | Francci3_4488 | L-glutamine synthetase. | Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | 0.911 |
ABD10178.1 | ABD09702.1 | Francci3_0794 | Francci3_0315 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-glutamine synthetase. | 0.937 |
ABD10178.1 | ABD12499.1 | Francci3_0794 | Francci3_3142 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-glutamine synthetase. | 0.963 |
ABD10178.1 | ABD12500.1 | Francci3_0794 | Francci3_3143 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | L-glutamine synthetase. | 0.940 |
ABD10178.1 | ABD13832.1 | Francci3_0794 | Francci3_4486 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.903 |
ABD10178.1 | ABD13833.1 | Francci3_0794 | Francci3_4487 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Mo-nitrogenase MoFe protein subunit NifD precursor. | 0.903 |
ABD10178.1 | nifH | Francci3_0794 | Francci3_4488 | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | 0.911 |
ABD12499.1 | ABD09702.1 | Francci3_3142 | Francci3_0315 | L-glutamine synthetase. | L-glutamine synthetase. | 0.932 |
ABD12499.1 | ABD10178.1 | Francci3_3142 | Francci3_0794 | L-glutamine synthetase. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.963 |
ABD12499.1 | ABD12500.1 | Francci3_3142 | Francci3_3143 | L-glutamine synthetase. | L-glutamine synthetase. | 0.947 |
ABD12499.1 | ABD13832.1 | Francci3_3142 | Francci3_4486 | L-glutamine synthetase. | Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. | 0.911 |
ABD12499.1 | ABD13833.1 | Francci3_3142 | Francci3_4487 | L-glutamine synthetase. | Mo-nitrogenase MoFe protein subunit NifD precursor. | 0.911 |
ABD12499.1 | nifH | Francci3_3142 | Francci3_4488 | L-glutamine synthetase. | Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein. | 0.911 |
ABD12500.1 | ABD09702.1 | Francci3_3143 | Francci3_0315 | L-glutamine synthetase. | L-glutamine synthetase. | 0.919 |
ABD12500.1 | ABD10178.1 | Francci3_3143 | Francci3_0794 | L-glutamine synthetase. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.940 |
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