Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB56130.1 | ABB56188.1 | Synpcc7942_0098 | Synpcc7942_0156 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoglucomutase. | 0.487 |
ABB56130.1 | ABB56570.1 | Synpcc7942_0098 | Synpcc7942_0538 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.960 |
ABB56130.1 | ABB56624.1 | Synpcc7942_0098 | Synpcc7942_0592 | Pyruvate kinase; Belongs to the pyruvate kinase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. | 0.999 |
ABB56130.1 | cbbA | Synpcc7942_0098 | Synpcc7942_1443 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.957 |
ABB56130.1 | eno | Synpcc7942_0098 | Synpcc7942_0639 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.999 |
ABB56130.1 | gap2 | Synpcc7942_0098 | Synpcc7942_1742 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glyceraldehyde 3-phosphate dehydrogenase (NADP+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.860 |
ABB56130.1 | pgi | Synpcc7942_0098 | Synpcc7942_2029 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase. | 0.999 |
ABB56130.1 | tal | Synpcc7942_0098 | Synpcc7942_2297 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily. | 0.917 |
ABB56130.1 | tpiA | Synpcc7942_0098 | Synpcc7942_1261 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.977 |
ABB56130.1 | zwf | Synpcc7942_0098 | Synpcc7942_2334 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.908 |
ABB56188.1 | ABB56130.1 | Synpcc7942_0156 | Synpcc7942_0098 | Phosphoglucomutase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.487 |
ABB56188.1 | ABB56570.1 | Synpcc7942_0156 | Synpcc7942_0538 | Phosphoglucomutase. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.939 |
ABB56188.1 | ABB56624.1 | Synpcc7942_0156 | Synpcc7942_0592 | Phosphoglucomutase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. | 0.547 |
ABB56188.1 | cbbA | Synpcc7942_0156 | Synpcc7942_1443 | Phosphoglucomutase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.833 |
ABB56188.1 | eno | Synpcc7942_0156 | Synpcc7942_0639 | Phosphoglucomutase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.690 |
ABB56188.1 | pgi | Synpcc7942_0156 | Synpcc7942_2029 | Phosphoglucomutase. | Glucose-6-phosphate isomerase. | 0.985 |
ABB56188.1 | tal | Synpcc7942_0156 | Synpcc7942_2297 | Phosphoglucomutase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily. | 0.914 |
ABB56188.1 | tpiA | Synpcc7942_0156 | Synpcc7942_1261 | Phosphoglucomutase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.569 |
ABB56188.1 | zwf | Synpcc7942_0156 | Synpcc7942_2334 | Phosphoglucomutase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.909 |
ABB56570.1 | ABB56130.1 | Synpcc7942_0538 | Synpcc7942_0098 | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.960 |
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