node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acnA | rplB | NMB0433 | NMB0145 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.634 |
acnA | rplC | NMB0433 | NMB0142 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.665 |
acnA | rplM | NMB0433 | NMB2057 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.590 |
acnA | rplN | NMB0433 | NMB0152 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome. | 0.622 |
acnA | rplO | NMB0433 | NMB0161 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.633 |
acnA | rplQ | NMB0433 | NMB0169 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 50S ribosomal protein L17; Identified by similarity to EGAD:19865; match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.822 |
acnA | rpsQ | NMB0433 | NMB0151 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.655 |
acnA | sodB | NMB0433 | NMB0884 | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.942 |
rplB | acnA | NMB0145 | NMB0433 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 0.634 |
rplB | rplC | NMB0145 | NMB0142 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.999 |
rplB | rplK | NMB0145 | NMB0127 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.998 |
rplB | rplM | NMB0145 | NMB2057 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplB | rplN | NMB0145 | NMB0152 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome. | 0.999 |
rplB | rplO | NMB0145 | NMB0161 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. | 0.999 |
rplB | rplQ | NMB0145 | NMB0169 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L17; Identified by similarity to EGAD:19865; match to protein family HMM PF01196; match to protein family HMM TIGR00059. | 0.998 |
rplB | rpsQ | NMB0145 | NMB0151 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplB | sodB | NMB0145 | NMB0884 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.889 |
rplC | acnA | NMB0142 | NMB0433 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | Aconitate hydratase 1; Identified by similarity to EGAD:160435; match to protein family HMM PF00330; match to protein family HMM PF00694; match to protein family HMM TIGR02333. | 0.665 |
rplC | rplB | NMB0142 | NMB0145 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
rplC | rplK | NMB0142 | NMB0127 | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |