trmB protein (Neisseria meningitidis) - STRING interaction network

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trmB

Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (238 aa)

Predicted Functional Partners:

truB

0.586

NMB1327

0.509

rsmB

0.461

NMB0867

0.456

rpmD

0.449

metG

0.427

NMB1137

0.424

NMB1858

0.424

funZ

0.421

NMB0739

0.411

Your Current Organism:

Neisseria meningitidis

NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NMB0739	NMB0867	NMB0739	NMB0867	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	YabO/YceC/SfhB family protein; Identified by similarity to EGAD:161394; match to protein family HMM PF00849.	0.574
NMB0739	rpmD	NMB0739	NMB0160	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.959
NMB0739	rsmB	NMB0739	NMB0112	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	16S RNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.733
NMB0739	trmB	NMB0739	NMB1328	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.411
NMB0739	truB	NMB0739	NMB1374	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.768
NMB0867	NMB0739	NMB0867	NMB0739	YabO/YceC/SfhB family protein; Identified by similarity to EGAD:161394; match to protein family HMM PF00849.	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	0.574
NMB0867	trmB	NMB0867	NMB1328	YabO/YceC/SfhB family protein; Identified by similarity to EGAD:161394; match to protein family HMM PF00849.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.456
NMB1137	trmB	NMB1137	NMB1328	Conserved hypothetical protein; Identified by similarity to GP:3046317; match to protein family HMM PF04384.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.424
NMB1327	trmB	NMB1327	NMB1328	Conserved hypothetical protein; Identified by similarity to EGAD:91374.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.509
NMB1858	trmB	NMB1858	NMB1328	Hypothetical protein; Identified by Glimmer2; putative.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.424
funZ	trmB	NMB0961	NMB1328	funZ protein; Identified by similarity to GP:3139107.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.421
metG	rpmD	NMB0030	NMB0160	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	0.608
metG	trmB	NMB0030	NMB1328	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.427
metG	truB	NMB0030	NMB1374	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.414
rpmD	NMB0739	NMB0160	NMB0739	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	0.959
rpmD	metG	NMB0160	NMB0030	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.	0.608
rpmD	rsmB	NMB0160	NMB0112	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	16S RNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.540
rpmD	trmB	NMB0160	NMB1328	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	Conserved hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.449
rpmD	truB	NMB0160	NMB1374	50S ribosomal protein L30; Identified by similarity to EGAD:29418; match to protein family HMM PF00327; match to protein family HMM TIGR01308.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.600
rsmB	NMB0739	NMB0112	NMB0739	16S RNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	Conserved hypothetical protein; Identified by similarity to EGAD:108433; match to protein family HMM PF01926; match to protein family HMM PF04079; match to protein family HMM TIGR00650.	0.733

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