STRINGSTRING
trpF trpF DSY3197 DSY3197 trpD trpD trpB trpB DSY3275 DSY3275 DSY3203 DSY3203 trpA trpA DSY3202 DSY3202 DSY2818 DSY2818 hisI hisI menF menF
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpFHypothetical protein; Similarity to COG0135 Phosphoribosylanthranilate isomerase(Evalue: 4E-33); Belongs to the TrpF family. (237 aa)    
Predicted Functional Partners:
DSY3197
Similarity to COG0134 Indole-3-glycerol phosphate synthase(Evalue: 3E-46); Belongs to the TrpC family.
 
 0.999
trpD
Hypothetical protein; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
 0.999
trpB
Hypothetical protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.999
DSY3275
Hypothetical protein; Similarity to COG0147 Anthranilate/para-aminobenzoate synthases component I(Evalue: 4E-83).
  
 0.999
DSY3203
Hypothetical protein; Similarity to COG0512 Anthranilate/para-aminobenzoate synthases component II(Evalue: 2E-49).
  
 0.997
trpA
Hypothetical protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
 
  
 0.996
DSY3202
Hypothetical protein; Similarity to COG0147 Anthranilate/para-aminobenzoate synthases component I(Evalue: 2E-78).
 
  
 0.968
DSY2818
Hypothetical protein; Similarity to COG0147 Anthranilate/para-aminobenzoate synthases component I(Evalue: 1E-56).
 
  
 0.917
hisI
Hypothetical protein; Similarity to COG0139 Phosphoribosyl-AMP cyclohydrolase(Evalue: 5E-29); In the N-terminal section; belongs to the PRA-CH family.
  
  
 0.812
menF
Similarity to COG1169 Isochorismate synthase(Evalue: 4E-83).
 
   
 0.742
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.