STRINGSTRING
DSY3629 DSY3629 DSY3630 DSY3630 DSY3263 DSY3263 DSY1069 DSY1069 DSY0770 DSY0770 DSY3381 DSY3381 DSY1103 DSY1103 spoIIAB spoIIAB DSY3264 DSY3264 DSY1958 DSY1958 DSY2982 DSY2982
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSY3629Hypothetical protein; Similarity to COG2208 Serine phosphatase RsbU, regulator of sigma subunit. (152 aa)    
Predicted Functional Partners:
DSY3630
Hypothetical protein.
      0.929
DSY3263
Hypothetical protein; Similarity to COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
 
 0.813
DSY1069
Hypothetical protein; Similarity to COG0515 Serine/threonine protein kinases.
  
     0.737
DSY0770
Hypothetical protein.
  
 
 0.713
DSY3381
Hypothetical protein; Similarity to COG2200 EAL domain(Evalue: 4E-59).
  
  
 0.670
DSY1103
Hypothetical protein.
  
  
 0.657
spoIIAB
Hypothetical protein; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
 
 0.644
DSY3264
Hypothetical protein; Similarity to COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 
 0.644
DSY1958
Hypothetical protein; Similarity to COG2247 Putative cell wall-binding domain(Evalue: 1E-33).
  
     0.628
DSY2982
Hypothetical protein; Similarity to COG1868 Flagellar motor switch protein(Evalue: 2E-81).
  
    0.575
Your Current Organism:
Desulfitobacterium hafniense
NCBI taxonomy Id: 138119
Other names: D. hafniense Y51, Desulfitobacterium hafniense Y51, Desulfitobacterium hafniense str. Y51, Desulfitobacterium hafniense strain Y51, Desulfitobacterium sp. Y51
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