STRINGSTRING
ddlB2 ddlB2 ddlB1 ddlB1 murF murF alr alr ddlA ddlA dat dat ACN14433.1 ACN14433.1 kamA2 kamA2 murC murC ftsQ ftsQ ftsA ftsA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddlB2DdlB2; D-alanine--D-alanine ligase B2 (D-alanylalanine synthetase A) (D-Ala-D-Ala ligase A). (332 aa)    
Predicted Functional Partners:
ddlB1
DdlB1; D-alanine-D-alanine ligase B1 (D-alanylalanine synthetase) (D-Ala-D-Ala ligase).
 
  
 
0.985
murF
MurF; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 
 0.954
alr
Alr; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.920
ddlA
DdlA; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
  
  
 
0.913
dat
Dat; D-alanine aminotransferase Dat.
   
 
 0.910
ACN14433.1
Histone deacetylase superfamily protein.
     0.896
kamA2
KamA2; L-lysine 2,3-aminomutase KamA.
     0.858
murC
MurC; Cell wall formation; Belongs to the MurCDEF family.
 
  
 0.784
ftsQ
FtsQ; Essential cell division protein.
  
  
 0.767
ftsA
FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
  
  
 0.764
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.