STRINGSTRING
bioB bioB bioD bioD bioA bioA DP2547 DP2547 DP2545 DP2545 DP0800 DP0800 DP2546 DP2546 DP3086 DP3086 DP0475 DP0475 DP2376 DP2376 argD argD
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
bioBRelated to biotin synthetase (BioB); Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (336 aa)    
Predicted Functional Partners:
bioD
Probable dethiobiotin synthase (BioD); Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
 
 
 0.998
bioA
Probable Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (BioA); Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.
  
 0.997
DP2547
Probable 8-amino-7-oxononanoate synthase (BioF).
  
 0.986
DP2545
Related to biotin synthesis protein (BioC).
 
  
 0.934
DP0800
Related to BirA bifunctional protein.
  
 
 0.913
DP2546
Hypothetical protein.
 
     0.910
DP3086
Related to biotin acetyl-CoA carboxylase ligase.
  
 
 0.909
DP0475
Conserved hypothetical protein.
     
  0.900
DP2376
Conserved hypothetical protein.
     
 
0.900
argD
Probable acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
  
 0.747
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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